Spatial normalization of brain images and beyond
The deformable atlas paradigm has been at the core of computational anatomy during the
last two decades. Spatial normalization is the variant endowing the atlas with a coordinate …
last two decades. Spatial normalization is the variant endowing the atlas with a coordinate …
Effects of registration regularization and atlas sharpness on segmentation accuracy
In non-rigid registration, the tradeoff between warp regularization and image fidelity is
typically determined empirically. In atlas-based segmentation, this leads to a probabilistic …
typically determined empirically. In atlas-based segmentation, this leads to a probabilistic …
Dense deformation field estimation for atlas-based segmentation of pathological MR brain images
Atlas registration is a recognized paradigm for the automatic segmentation of normal MR
brain images. Unfortunately, atlas-based segmentation has been of limited use in presence …
brain images. Unfortunately, atlas-based segmentation has been of limited use in presence …
[PDF][PDF] Segmentation propagation from deformable atlases for brain mapping and analysis
MG Linguraru, T Vercauteren… - Brain Research …, 2007 - researchgate.net
Magnetic resonance imaging (MRI) is commonly employed for the depiction of soft tissues,
most notably the human brain. Computer-aided image analysis techniques lead to image …
most notably the human brain. Computer-aided image analysis techniques lead to image …
Effects of registration regularization and atlas sharpness on segmentation accuracy
In this paper, we propose a unified framework for computing atlases from manually labeled
data at various degrees of “sharpness” and the joint registration-segmentation of a new …
data at various degrees of “sharpness” and the joint registration-segmentation of a new …
Brain atlases and neuroanatomic imaging
CJ Crasto, SH Koslow, A MacKenzie-Graham, J Boline… - Neuroinformatics, 2007 - Springer
Quantifying the effect of a genetic manipulation or disease is a complicated process in a
population of animals. Probabilistic brain atlases can capture population variability and be …
population of animals. Probabilistic brain atlases can capture population variability and be …
Computational and mathematical methods in brain atlasing
WL Nowinski - The Neuroradiology Journal, 2017 - journals.sagepub.com
Brain atlases have a wide range of use from education to research to clinical applications.
Mathematical methods as well as computational methods and tools play a major role in the …
Mathematical methods as well as computational methods and tools play a major role in the …
Simulating deformations of MR brain images for validation of atlas-based segmentation and registration algorithms
Simulated deformations and images can act as the gold standard for evaluating various
template-based image segmentation and registration algorithms. Traditional deformable …
template-based image segmentation and registration algorithms. Traditional deformable …
Effect of inter-subject variation on the accuracy of atlas-based segmentation applied to human brain structures
Large variations occur in brain anatomical structures in human populations, presenting a
critical challenge to the brain mapping process. This study investigates the major impact of …
critical challenge to the brain mapping process. This study investigates the major impact of …
A template free approach to volumetric spatial normalization of brain anatomy
C Studholme, V Cardenas - Pattern Recognition Letters, 2004 - Elsevier
Approaches to brain image spatial normalization conventionally make use of a target image
to which each subject image is separately matched. In many cases the use of a single brain …
to which each subject image is separately matched. In many cases the use of a single brain …