Metabolic footprinting: Extracellular metabolomic analysis
V Behrends, HD Williams, JG Bundy - Pseudomonas Methods and …, 2014 - Springer
Uptake and excretion of nutrients is an integral part of a cell's physiology. Using analytical
chemistry techniques, metabolite uptake and excretion from the culture medium can be …
chemistry techniques, metabolite uptake and excretion from the culture medium can be …
Time-resolved metabolic footprinting for nonlinear modeling of bacterial substrate utilization
V Behrends, TMD Ebbels, HD Williams… - Applied and …, 2009 - Am Soc Microbiol
Untargeted profiling of small-molecule metabolites from microbial culture supernatants
(metabolic footprinting) has great potential as a phenotyping tool. We used time-resolved …
(metabolic footprinting) has great potential as a phenotyping tool. We used time-resolved …
High‐throughput dilution‐based growth method enables time‐resolved exo‐metabolomics of Pseudomonas putida and Pseudomonas aeruginosa
Understanding metabolism is fundamental to access and harness bacterial physiology. In
most bacteria, nutrient utilization is hierarchically optimized according to their energetic …
most bacteria, nutrient utilization is hierarchically optimized according to their energetic …
Metabolic footprinting in microbiology: methods and applications in functional genomics and biotechnology
Metabolomics embraces several strategies that aim to quantify cell metabolites in order to
increase our understanding of how metabolite levels and interactions influence phenotypes …
increase our understanding of how metabolite levels and interactions influence phenotypes …
Optimization of metabolite extraction protocols for the identification and profiling of small molecule metabolites from planktonic and biofilm Pseudomonas aeruginosa …
A Fuchs, BP Tripet, CB Ammons… - Current …, 2016 - ingentaconnect.com
Background: Metabolomics aims to characterize the metabolic phenotype and metabolic
pathways utilized by microorganisms or other cellular systems. A crucial component to …
pathways utilized by microorganisms or other cellular systems. A crucial component to …
Metabolic fingerprinting of bacteria by fluorescence lifetime imaging microscopy
Bacterial populations exhibit a range of metabolic states influenced by their environment,
intra-and interspecies interactions. The identification of bacterial metabolic states and …
intra-and interspecies interactions. The identification of bacterial metabolic states and …
Visualization of mRNA expression in Pseudomonas aeruginosa aggregates reveals spatial patterns of fermentative and denitrifying metabolism
Gaining insight into the behavior of bacteria at the single-cell level is important given that
heterogeneous microenvironments strongly influence microbial physiology. The …
heterogeneous microenvironments strongly influence microbial physiology. The …
Staring into the void: demystifying microbial metabolomics
CM Grim, GT Luu, LM Sanchez - FEMS microbiology letters, 2019 - academic.oup.com
Metabolites give us a window into the chemistry of microbes and are split into two
subclasses: primary and secondary. Primary metabolites are required for life whereas …
subclasses: primary and secondary. Primary metabolites are required for life whereas …
NMR Metabolomics of Planktonic and Biofilm Modes of Growth in Pseudomonas aeruginosa
EL Gjersing, JL Herberg, J Horn… - Analytical …, 2007 - ACS Publications
Bacteria often reside in communities where the cells have secreted sticky, polymeric
compounds that allow them to attach to surfaces. This sessile lifestyle, referred to as a …
compounds that allow them to attach to surfaces. This sessile lifestyle, referred to as a …
How Pseudomonas aeruginosa adapts to various environments: a metabolomic approach
E Frimmersdorf, S Horatzek… - Environmental …, 2010 - Wiley Online Library
In addition to transcriptome and proteome studies, metabolome analysis represents a third
complementary approach to identify metabolic pathways and adaptation processes. In order …
complementary approach to identify metabolic pathways and adaptation processes. In order …