Disparate proteome reactivity profiles of carbon electrophiles
Insights into the proteome reactivity of electrophiles are crucial for designing activity-based
probes for enzymes lacking cognate affinity labels. Here, we show that different classes of …
probes for enzymes lacking cognate affinity labels. Here, we show that different classes of …
Covalent protein modification: the current landscape of residue-specific electrophiles
DA Shannon, E Weerapana - Current opinion in chemical biology, 2015 - Elsevier
Highlights•Electrophiles can show distinct amino-acid selectivities in proteomes.•The
judicious selection of an electrophile is critical to various chemical-proteomic applications.•A …
judicious selection of an electrophile is critical to various chemical-proteomic applications.•A …
Investigating the proteome reactivity and selectivity of aryl halides
DA Shannon, R Banerjee, ER Webster… - Journal of the …, 2014 - ACS Publications
Protein-reactive electrophiles are critical to chemical proteomic applications including
activity-based protein profiling, site-selective protein modification, and covalent inhibitor …
activity-based protein profiling, site-selective protein modification, and covalent inhibitor …
Profiling the proteome-wide selectivity of diverse electrophiles
Targeted covalent inhibitors are powerful entities in drug discovery, but their application has
so far mainly been limited to addressing cysteine residues. The development of cysteine …
so far mainly been limited to addressing cysteine residues. The development of cysteine …
Reimagining high-throughput profiling of reactive cysteines for cell-based screening of large electrophile libraries
Current methods used for measuring amino acid side-chain reactivity lack the throughput
needed to screen large chemical libraries for interactions across the proteome. Here we …
needed to screen large chemical libraries for interactions across the proteome. Here we …
Multi-tiered chemical proteomic maps of tryptoline acrylamide–protein interactions in cancer cells
E Njomen, RE Hayward, KE DeMeester… - Nature Chemistry, 2024 - nature.com
Covalent chemistry is a versatile approach for expanding the ligandability of the human
proteome. Activity-based protein profiling (ABPP) can infer the specific residues modified by …
proteome. Activity-based protein profiling (ABPP) can infer the specific residues modified by …
Chemoproteomic profiling and discovery of protein electrophiles in human cells
Activity-based protein profiling (ABPP) serves as a chemical proteomic platform to discover
and characterize functional amino acids in proteins on the basis of their enhanced reactivity …
and characterize functional amino acids in proteins on the basis of their enhanced reactivity …
Global profiling of lysine reactivity and ligandability in the human proteome
Nucleophilic amino acids make important contributions to protein function, including
performing key roles in catalysis and serving as sites for post-translational modification …
performing key roles in catalysis and serving as sites for post-translational modification …
Tunable Amine‐Reactive Electrophiles for Selective Profiling of Lysine
Proteome profiling by activated esters identified> 9000 ligandable lysines but they are
limited as covalent inhibitors due to poor hydrolytic stability. Here we report our efforts to …
limited as covalent inhibitors due to poor hydrolytic stability. Here we report our efforts to …