[HTML][HTML] ZEAMAP, a comprehensive database adapted to the maize multi-omics era

S Gui, L Yang, J Li, J Luo, X Xu, J Yuan, L Chen, W Li… - IScience, 2020 - cell.com
As one of the most extensively cultivated crops, maize (Zea mays L.) has been extensively
studied by researchers and breeders for over a century. With advances in high-throughput …

[HTML][HTML] Genome-wide association study of soybean (Glycine max [L.] Merr.) germplasm for dissecting the quantitative trait nucleotides and candidate genes …

R Rani, G Raza, H Ashfaq, M Rizwan… - Frontiers in Plant …, 2023 - frontiersin.org
Soybean (Glycine max [L.] Merr.) is one of the most significant crops in the world in terms of
oil and protein. Owing to the rising demand for soybean products, there is an increasing …

[HTML][HTML] A systems biology approach toward understanding seed composition in soybean

L Li, M Hur, JY Lee, W Zhou, Z Song, N Ransom… - BMC genomics, 2015 - Springer
Background The molecular, biochemical, and genetic mechanisms that regulate the
complex metabolic network of soybean seed development determine the ultimate balance of …

[HTML][HTML] Integrating omics databases for enhanced crop breeding

H Chao, S Zhang, Y Hu, Q Ni, S Xin, L Zhao… - Journal of Integrative …, 2024 - degruyter.com
Crop plant breeding involves selecting and developing new plant varieties with desirable
traits such as increased yield, improved disease resistance, and enhanced nutritional value …

[HTML][HTML] Genome-wide scan for seed composition provides insights into soybean quality improvement and the impacts of domestication and breeding

J Zhang, X Wang, Y Lu, SJ Bhusal, Q Song, PB Cregan… - Molecular Plant, 2018 - cell.com
The complex genetic architecture of quality traits has hindered efforts to modify seed
nutrients in soybean. Genome-wide association studies were conducted for seed …

Progress in soybean functional genomics over the past decade

M Zhang, S Liu, Z Wang, Y Yuan… - Plant Biotechnology …, 2022 - Wiley Online Library
Soybean is one of the most important oilseed and fodder crops. Benefiting from the efforts of
soybean breeders and the development of breeding technology, large number of …

[HTML][HTML] BnIR: A multi-omics database with various tools for Brassica napus research and breeding

Z Yang, S Wang, L Wei, Y Huang, D Liu, Y Jia, C Luo… - Molecular Plant, 2023 - cell.com
In the post-genome-wide association study era, multi-omics techniques have shown great
power and potential for candidate gene mining and functional genomics research. However …

MCENet: a database for maize conditional co-expression network and network characterization collaborated with multi-dimensional omics levels

T Tian, Q You, H Yan, W Xu, Z Su - Journal of Genetics and Genomics, 2018 - Elsevier
Maize (Zea mays) is the most widely grown grain crop in the world, playing important roles in
agriculture and industry. However, the functions of maize genes remain largely unknown …

[HTML][HTML] TILLING-by-Sequencing+ to Decipher Oil Biosynthesis Pathway in Soybeans: A New and Effective Platform for High-Throughput Gene Functional Analysis

N Lakhssassi, Z Zhou, MA Cullen, O Badad… - International Journal of …, 2021 - mdpi.com
Reverse genetic approaches have been widely applied to study gene function in crop
species; however, these techniques, including gel-based TILLING, present low efficiency to …

[HTML][HTML] OPTIMAS-DW: a comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize

C Colmsee, M Mascher, T Czauderna, A Hartmann… - BMC Plant …, 2012 - Springer
Background Maize is a major crop plant, grown for human and animal nutrition, as well as a
renewable resource for bioenergy. When looking at the problems of limited fossil fuels, the …