Metabolic flux analysis of a phenol producing mutant of Pseudomonas putida S12: verification and complementation of hypotheses derived from transcriptomics
The physiological effects of genetic and transcriptional changes observed in a phenol
producing mutant of the solvent-tolerant Pseudomonas putida S12 were assessed with …
producing mutant of the solvent-tolerant Pseudomonas putida S12 were assessed with …
Transcriptome Analysis of a Phenol-Producing Pseudomonas putida S12 Construct: Genetic and Physiological Basis for Improved Production
The unknown genetic basis for improved phenol production by a recombinant
Pseudomonas putida S12 derivative bearing the tpl (tyrosine-phenol lyase) gene was …
Pseudomonas putida S12 derivative bearing the tpl (tyrosine-phenol lyase) gene was …
Analysis of Pseudomonas putida growth on non‐trivial carbon sources using transcriptomics and genome‐scale modelling
I D'Arrigo, JGR Cardoso, M Rennig… - Environmental …, 2019 - Wiley Online Library
Pseudomonas putida is characterized by a versatile metabolism and stress tolerance traits
that allow the bacterium to cope with different environmental conditions. In this work, the …
that allow the bacterium to cope with different environmental conditions. In this work, the …
Multi-omics analysis unravels a segregated metabolic flux network that tunes co-utilization of sugar and aromatic carbons in Pseudomonas putida
Pseudomonas species thrive in different nutritional environments and can catabolize
divergent carbon substrates. These capabilities have important implications for the role of …
divergent carbon substrates. These capabilities have important implications for the role of …
Metabolic engineering of Pseudomonas taiwanensis VLB120 with minimal genomic modifications for high-yield phenol production
Aromatic chemicals are important building blocks for the production of a multitude of
everyday commodities. Currently, aromatics production relies almost exclusively on …
everyday commodities. Currently, aromatics production relies almost exclusively on …
Convergent Peripheral Pathways Catalyze Initial Glucose Catabolism in Pseudomonas putida: Genomic and Flux Analysis
T Del Castillo, JL Ramos… - Journal of …, 2007 - Am Soc Microbiol
In this study, we show that glucose catabolism in Pseudomonas putida occurs through the
simultaneous operation of three pathways that converge at the level of 6-phosphogluconate …
simultaneous operation of three pathways that converge at the level of 6-phosphogluconate …
Functional implementation of a linear glycolysis for sugar catabolism in Pseudomonas putida
A Sánchez-Pascuala, L Fernández-Cabezón… - Metabolic …, 2019 - Elsevier
The core metabolism for glucose assimilation of the soil bacterium and platform strain
Pseudomonas putida KT2440 has been reshaped from the native, cyclically-operating …
Pseudomonas putida KT2440 has been reshaped from the native, cyclically-operating …
Comprehensive analysis of the metabolome of Pseudomonas putida S12 grown on different carbon sources
MJ van der Werf, KM Overkamp, B Muilwijk… - Molecular …, 2008 - pubs.rsc.org
Metabolomics is an emerging, powerful, functional genomics technology that involves the
comparative non-targeted analysis of the complete set of metabolites in an organism. We …
comparative non-targeted analysis of the complete set of metabolites in an organism. We …
Integrated analysis of gene expression and metabolic fluxes in PHA-producing Pseudomonas putida grown on glycerol
V Beckers, I Poblete-Castro, J Tomasch… - Microbial Cell …, 2016 - Springer
Background Given its high surplus and low cost, glycerol has emerged as interesting carbon
substrate for the synthesis of value-added chemicals. The soil bacterium Pseudomonas …
substrate for the synthesis of value-added chemicals. The soil bacterium Pseudomonas …
A cyclic metabolic network in Pseudomonas protegens Pf-5 prioritizes the Entner-Doudoroff pathway and exhibits substrate hierarchy during carbohydrate co …
RA Wilkes, CM Mendonca… - Applied and environmental …, 2019 - Am Soc Microbiol
The genetic characterization of Pseudomonas protegens Pf-5 was recently completed.
However, the inferred metabolic network structure has not yet been evaluated …
However, the inferred metabolic network structure has not yet been evaluated …