[HTML][HTML] Model-based characterization of inflammatory gene expression patterns of activated macrophages

J Rex, U Albrecht, C Ehlting, M Thomas… - PLoS computational …, 2016 - journals.plos.org
Macrophages are cells with remarkable plasticity. They integrate signals from their
microenvironment leading to context-dependent polarization into classically (M1) or …

[HTML][HTML] Network analysis reveals a distinct axis of macrophage activation in response to conflicting inflammatory cues

X Liu, J Zhang, AC Zeigler, AR Nelson… - The Journal of …, 2021 - journals.aai.org
Macrophages are subject to a wide range of cytokine and pathogen signals in vivo, which
contribute to differential activation and modulation of inflammation. Understanding the …

[HTML][HTML] Gene regulatory network modeling of macrophage differentiation corroborates the continuum hypothesis of polarization states

A Palma, AS Jarrah, P Tieri, G Cesareni… - Frontiers in …, 2018 - frontiersin.org
Macrophages derived from monocyte precursors undergo specific polarization processes
which are influenced by the local tissue environment: classically activated (M1) …

[HTML][HTML] Integrated transcriptomics establish macrophage polarization signatures and have potential applications for clinical health and disease

M Becker, MA De Bastiani, MM Parisi, FTCR Guma… - Scientific reports, 2015 - nature.com
Growing evidence defines macrophages (Mφ) as plastic cells with wide-ranging states of
activation and expression of different markers that are time and location dependent. Distinct …

Deconvolution of heterogeneous wound tissue samples into relative macrophage phenotype composition via models based on gene expression

NM Ferraro, W Dampier, MS Weingarten… - Integrative …, 2017 - academic.oup.com
Macrophages, the primary cell of the innate immune system, act on a spectrum of
phenotypes that correspond to diverse functions. Dysregulation of macrophage phenotype is …

[HTML][HTML] A mechanistic integrative computational model of macrophage polarization: Implications in human pathophysiology

C Zhao, AC Mirando, RJ Sové… - PLoS computational …, 2019 - journals.plos.org
Macrophages respond to signals in the microenvironment by changing their functional
phenotypes, a process known as polarization. Depending on the context, they acquire …

[HTML][HTML] Transcriptome-based network analysis reveals a spectrum model of human macrophage activation

J Xue, SV Schmidt, J Sander, A Draffehn, W Krebs… - Immunity, 2014 - cell.com
Macrophage activation is associated with profound transcriptional reprogramming. Although
much progress has been made in the understanding of macrophage activation, polarization …

[HTML][HTML] Transcriptomic Profiling of the Development of the Inflammatory Response in Human Monocytes In Vitro

P Italiani, EMC Mazza, D Lucchesi, I Cifola, C Gemelli… - PloS one, 2014 - journals.plos.org
Monocytes/macrophages are key players in all phases of physiological and pathological
inflammation. To understanding the regulation of macrophage functional differentiation …

[HTML][HTML] Transcriptional profiling identifies novel regulators of macrophage polarization

KY Gerrick, ER Gerrick, A Gupta, SJ Wheelan… - PloS one, 2018 - journals.plos.org
Macrophages are key inflammatory immune cells that display dynamic phenotypes and
functions in response to their local microenvironment. Major advances have occurred in …

[HTML][HTML] GPX-macrophage expression atlas: a database for expression profiles of macrophages challenged with a variety of pro-inflammatory, anti-inflammatory …

GR Grimes, S Moodie, JS Beattie, M Craigon… - BMC genomics, 2005 - Springer
Background Macrophages play an integral role in the host immune system, bridging innate
and adaptive immunity. As such, they are finely attuned to extracellular and intracellular …