The outs and ins of transposition: from mu to kangaroo

MJ Curcio, KM Derbyshire - Nature Reviews Molecular Cell Biology, 2003 - nature.com
Transposons are ubiquitous in prokaryotic and eukaryotic organisms and are major
determinants of genome structure. Transposition—the movement of discrete segments of …

[HTML][HTML] Burst of young retrogenes and independent retrogene formation in mammals

D Pan, L Zhang - PloS one, 2009 - journals.plos.org
Retroposition and retrogenes gain increasing attention as recent studies show that they play
an important role in human new gene formation. Here we examined the patterns of …

[HTML][HTML] Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction

A Sookdeo, CM Hepp, S Boissinot - Mobile DNA, 2018 - Springer
Abstract Background LINE-1 (L1) is the dominant autonomously replicating non-LTR
retrotransposon in mammals. Although our knowledge of L1 evolution across the tree of life …

Multiple Invasions of Visitor, a DD41D Family of Tc1/mariner Transposons, throughout the Evolution of Vertebrates

D Shen, B Gao, C Miskey, C Chen… - Genome Biology and …, 2020 - academic.oup.com
Although the DD41D (named as Visitor, VS) family of Tc1/mariner transposons was
discovered in Arthropods and Mollusca, the evolution profile of this family is still largely …

Transposable element interactions shape the ecology of the deer mouse genome

L Gozashti, C Feschotte… - Molecular Biology and …, 2023 - academic.oup.com
The genomic landscape of transposable elements (TEs) varies dramatically across species,
with some TEs demonstrating greater success in colonizing particular lineages than others …

Comparative analyses of multi-species sequences from targeted genomic regions

JW Thomas, JW Touchman, RW Blakesley… - Nature, 2003 - nature.com
The systematic comparison of genomic sequences from different organisms represents a
central focus of contemporary genome analysis. Comparative analyses of vertebrate …

Not born equal: increased rate asymmetry in relocated and retrotransposed rodent gene duplicates

BP Cusack, KH Wolfe - Molecular biology and evolution, 2007 - academic.oup.com
Duplicated genes frequently evolve at different rates. This asymmetry is evidence of natural
selection's ability to discriminate between the 2 copies, subjecting them to different levels of …

Evolutionary impact of transposable elements on genomic diversity and lineage-specific innovation in vertebrates

IA Warren, M Naville, D Chalopin, P Levin… - Chromosome …, 2015 - Springer
Since their discovery, a growing body of evidence has emerged demonstrating that
transposable elements are important drivers of species diversity. These mobile elements …

[PDF][PDF] Similar evolutionary trajectories for retrotransposon accumulation in mammals

RM Buckley, RD Kortschak, JM Raison… - Genome biology and …, 2017 - academic.oup.com
The factors guiding retrotransposon insertion site preference are not well understood.
Different types of retrotransposons share common replication machinery and yet occupy …

Frequent retroviral gene co-option during the evolution of vertebrates

J Wang, GZ Han - Molecular Biology and Evolution, 2020 - academic.oup.com
Endogenous retroviruses are ubiquitous in the vertebrate genomes. On occasion, hosts
recruited retroviral genes to mediate their own biological functions, a process formally …