Multi-locus genome-wide association studies for five yield-related traits in rice

H Zhong, S Liu, T Sun, W Kong, X Deng, Z Peng, Y Li - BMC Plant Biology, 2021 - Springer
Background Improving the overall production of rice with high quality is a major target of
breeders. Mining potential yield-related loci have been geared towards developing efficient …

[HTML][HTML] A meta-quantitative trait loci analysis identified consensus genomic regions and candidate genes associated with grain yield in rice

KD Aloryi, NE Okpala, A Amo, SF Bello… - Frontiers in Plant …, 2022 - frontiersin.org
Improving grain yield potential in rice is an important step toward addressing global food
security challenges. The meta-QTL analysis offers stable and robust QTLs irrespective of the …

[PDF][PDF] Genome-wide association studies in rice: how to solve the low power problems?

X Zhou, X Huang - Molecular plant, 2019 - cell.com
In human genetics, genome-wide association study (GWAS) is a commonly used method for
discovering genes and genetic variants contributing to human traits, usually through …

Genome-wide association study and Mendelian randomization analysis provide insights for improving rice yield potential

J Su, K Xu, Z Li, Y Hu, Z Hu, X Zheng, S Song… - Scientific Reports, 2021 - nature.com
Rice yield per plant has a complex genetic architecture, which is mainly determined by its
three component traits: the number of grains per panicle (GPP), kilo-grain weight (KGW) …

Gene based markers improve precision of genome-wide association studies and accuracy of genomic predictions in rice breeding

C Anilkumar, TP Muhammed Azharudheen, RP Sah… - Heredity, 2023 - nature.com
It is hypothesized that the genome-wide genic markers may increase the prediction accuracy
of genomic selection for quantitative traits. To test this hypothesis, a set of candidate gene …

Identification of QTNs, QTN-by-environment interactions and genes for yield-related traits in rice using 3VmrMLM

J Zhang, S Wang, X Wu, L Han, Y Wang… - Frontiers in Plant …, 2022 - frontiersin.org
Rice, which supports more than half the population worldwide, is one of the most important
food crops. Thus, potential yield-related quantitative trait nucleotides (QTNs) and QTN-by …

Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor‐made rice with enhanced …

R Abbai, VK Singh, VV Nachimuthu… - Plant biotechnology …, 2019 - Wiley Online Library
Though several genes governing various major traits have been reported in rice, their
superior haplotype combinations for developing ideal variety remains elusive. In this study …

[HTML][HTML] Genetic dissection of grain size traits through genome-wide association study based on genic markers in rice

AK Nayak, C Anilkumar, S Behera, RP Sah… - Rice Science, 2022 - Elsevier
Grain size plays a significant role in rice, starting from affecting yield to consumer
preference, which is the driving force for deep investigation and improvement of grain size …

Genomic regions involved in yield potential detected by genome-wide association analysis in Japanese high-yielding rice cultivars

J Yonemaru, R Mizobuchi, H Kato, T Yamamoto… - BMC genomics, 2014 - Springer
Background High-yielding cultivars of rice (Oryza sativa L.) have been developed in Japan
from crosses between overseas indica and domestic japonica cultivars. Recently, next …

[HTML][HTML] An efficient strategy combining SSR markers-and advanced QTL-seq-driven QTL mapping unravels candidate genes regulating grain weight in rice

A Daware, S Das, R Srivastava, S Badoni… - Frontiers in plant …, 2016 - frontiersin.org
Development and use of genome-wide informative simple sequence repeat (SSR) markers
and novel integrated genomic strategies are vital to drive genomics-assisted breeding …