[HTML][HTML] Plastid phylogenomic insights into relationships of all flowering plant families

HT Li, Y Luo, L Gan, PF Ma, LM Gao, JB Yang, J Cai… - BMC biology, 2021 - Springer
Background Flowering plants (angiosperms) are dominant components of global terrestrial
ecosystems, but phylogenetic relationships at the familial level and above remain only …

[HTML][HTML] From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes

BR Ruhfel, MA Gitzendanner, PS Soltis… - BMC evolutionary …, 2014 - Springer
Background Next-generation sequencing has provided a wealth of plastid genome
sequence data from an increasingly diverse set of green plants (Viridiplantae). Although …

Plastome phylogenetics: 30 years of inferences into plant evolution

MA Gitzendanner, PS Soltis, TS Yi, DZ Li… - Advances in botanical …, 2018 - Elsevier
From restriction site analyses to whole plastid genome sequences, our understanding of
green plant (Viridiplantae;~ 500,000 extant species) evolutionary relationships over the past …

Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture

YY Yang, XJ Qu, R Zhang, GW Stull, TS Yi - Molecular Phylogenetics and …, 2021 - Elsevier
Plastid phylogenomic analyses have shed light on many recalcitrant relationships across the
angiosperm Tree of Life and continue to play an important role in plant phylogenetics …

Plastid phylogenomic analysis of green plants: a billion years of evolutionary history

MA Gitzendanner, PS Soltis, GKS Wong… - American Journal of …, 2018 - Wiley Online Library
Premise of the Study For the past one billion years, green plants (Viridiplantae) have
dominated global ecosystems, yet many key branches in their evolutionary history remain …

Plastid phylogenomics improve phylogenetic resolution in the Lauraceae

Y Song, WB Yu, YH Tan, JJ Jin, B Wang… - … of Systematics and …, 2020 - Wiley Online Library
The family Lauraceae is a major component of tropical and subtropical forests worldwide,
and includes some commercially important timber trees and medicinal plants. However …

Exploration of plastid phylogenomic conflict yields new insights into the deep relationships of Leguminosae

R Zhang, YH Wang, JJ Jin, GW Stull… - Systematic …, 2020 - academic.oup.com
Phylogenomic analyses have helped resolve many recalcitrant relationships in the
angiosperm tree of life, yet phylogenetic resolution of the backbone of the Leguminosae …

[HTML][HTML] Plastome phylogenomic study of Gentianeae (Gentianaceae): widespread gene tree discordance and its association with evolutionary rate heterogeneity of …

X Zhang, Y Sun, JB Landis, Z Lv, J Shen, H Zhang… - BMC Plant …, 2020 - Springer
Background Plastome-scale data have been prevalent in reconstructing the plant Tree of
Life. However, phylogenomic studies currently based on plastomes rely primarily on …

Plastid genomes reveal support for deep phylogenetic relationships and extensive rate variation among palms and other commelinid monocots

CF Barrett, WJ Baker, JR Comer, JG Conran… - New …, 2016 - Wiley Online Library
Despite progress based on multilocus, phylogenetic studies of the palms (order Arecales,
family Arecaceae), uncertainty remains in resolution/support among major clades and for the …

Phylogenetic analysis of the plastid inverted repeat for 244 species: insights into deeper-level angiosperm relationships from a long, slowly evolving sequence region

MJ Moore, N Hassan… - … Journal of Plant …, 2011 - journals.uchicago.edu
Recent plastid phylogenomic studies have helped clarify the backbone phylogeny of
angiosperms. However, the relatively limited taxon sampling in these studies has precluded …