Protein‐protein interactions are abundant in the cell but to date structural data for a large
number of complexes is lacking. Computational docking methods can complement …

Protein-protein docking protocols aim to predict the structures of protein-protein complexes
based on the structure of individual partners. Docking protocols usually include several …

The protein-protein docking problem is one of the focal points of activity in computational
biophysics and structural biology. The three-dimensional structure of a protein-protein …

Motivation Computational prediction of protein–protein complex structure by docking can
provide structural and mechanistic insights for protein interactions of biomedical interest …

Three-dimensional structures of only a small fraction of known protein–protein complexes
are currently known. Meanwhile, computational methods are of increasing importance to …

The increasing availability of co-crystallized protein-protein complexes provides an
opportunity to use template-based modeling for protein-protein docking. Structure alignment …

Protein recognition is one of the most challenging and intriguing problems in structural
biology. Despite all the available structural, sequence and biophysical information about …

Computational protein–protein docking methods currently can create models with atomic
accuracy for protein complexes provided that the conformational changes upon association …

Motivation: The limited success rate of protein–protein docking procedures is generally
attributed to structure differences between the bound and unbound states of the molecules …

Structural details of protein–protein interactions are invaluable for understanding and
deciphering biological mechanisms. Computational docking methods aim to predict the …