Synthesis and monitored selection of 5′-nucleobase-capped oligodeoxyribonucleotides

AA Mokhir, C Richert - Nucleic Acids Research, 2000 - academic.oup.com
Oligodeoxynucleotides bearing 5′-appendages consisting of a nucleobase and an amide
linkage were prepared from 5′-amino-5′-deoxyoligonucleotides, amino acid building …

Modified ollgonucleotides. Effect of 4 vs 5-atom chimeric internucleoside linkages on duplex stability

G Stork, C Zhang, S Gryaznov, R Schultz - Tetrahedron letters, 1995 - Elsevier
Modified Oligonucleotides. Effect of 4 vs 5-atom Chimeric Internucleoside Linkages on Duplex
Stability. Gilbert Stork* a, Chengz Page 1 Pergamon 0040-4039(95)01320-2 Tetrahedron …

The ups and downs of nucleic acid duplex stability: structure-stability studies on chemically-modified DNA: RNA duplexes

SM Freier, KH Altmann - Nucleic acids research, 1997 - academic.oup.com
In an effort to discover novel oligonucleotide modifications for antisense therapeutics, we
have prepared oligodeoxyribonucleotides containing more than 200 different modifications …

Selective modification of cytosines in oligodeoxyribonucleotides

PS Miller, CD Cushman - Bioconjugate chemistry, 1992 - ACS Publications
A single deoxycytidine residing in an oligodeoxyribonucleotide which also contains 5-
methyldeoxycytidines can be selectively derivatized with various alkylamines by sodium …

Oligo-2 '-deoxyribonucleotides Containing Uracil Modified at the 5-Position with Linkers Ending with Guanidinium Groups

V Roig, U Asseline - Journal of the American Chemical Society, 2003 - ACS Publications
We report here the synthesis and binding studies of oligo-2 '-deoxyribonucleotides (ODNs)
containing 2 '-deoxyuridines, modified at the 5-position by linkers ending with either one or …

Synthesis and stability of oligonucleotide duplexes containing N4 aralkyl-substituted cytosine bases

MP Wallis, CH Schwalbe, W Fraser - Nucleosides, Nucleotides & …, 1997 - Taylor & Francis
N4 aralkyl-substituted cytosine nucleosides, available dxectly by displacement of the PfpO
group at C4 of 5′-O-DMT-protected nucleoside 4, were efficiently incorporated into short …

Oligodeoxynucleotide Duplexes Containing (5′S)‐5′‐C‐Alkyl‐Modified 2′‐Deoxynucleosides: Can an Alkyl Zipper across the DNA Minor‐Groove Enhance …

H Trafelet, SP Parel, CJ Leumann - Helvetica chimica acta, 2003 - Wiley Online Library
A series of oligonucleotides containing (5′ S)‐5′‐C‐butyl‐and (5′ S)‐5′‐C‐isopentyl‐
substituted 2′‐deoxyribonucleosides were designed, prepared, and characterized with the …

Nucleosides and Nucleotides. 208. Alternate-Strand Triple-Helix Formation by the 3 '-3 '-Linked Oligodeoxynucleotides with the Anthraquinonyl Group at the Junction …

Y Ueno, M Mikawa, S Hoshika… - Bioconjugate Chemistry, 2001 - ACS Publications
The synthesis of 3 '-3 '-linked oligodeoxynucleotides (ODNs) with the anthraquinonyl group
at the junction point is described. The ODNs were synthesized on a DNA synthesizer using a …

Stabilization of DNA triple helices using conjugates of oligonucleotides and synthetic ligands

AN Sinyakov, VA Ryabinin, GN Grimm, AS Boutorine - Molecular Biology, 2001 - Springer
The possibility is discussed of stabilizing a DNA triple helix by covalent conjugation to the
third strand (through its terminal phosphate) of ligands that have affinity to double and triple …

Synthesis and hybridization properties of oligonucleotides containing 2'-O-modified ribonucleotides

R Haner, TH Keller - Nucleic acids research, 1993 - academic.oup.com
A versatile, general way is described for the introduction of different functional groups into
oligonucleotides by means of a simple linker at the 2'-position of the sugar. Nucleotide …