Estimating the retrotransposition rate of human Alu elements

R Cordaux, DJ Hedges, SW Herke, MA Batzer - Gene, 2006 - Elsevier
Mobile elements such as Alu repeats have substantially altered the architecture of the
human genome, and de novo mobile element insertions sometimes cause genetic …

[HTML][HTML] In search of polymorphic Alu insertions with restricted geographic distributions

R Cordaux, D Srikanta, J Lee, M Stoneking, MA Batzer - Genomics, 2007 - Elsevier
Alu elements are transposable elements that have reached over one million copies in the
human genome. Some Alu elements inserted in the genome so recently that they are still …

Discovery of rare, diagnostic AluYb8/9 elements in diverse human populations

J Feusier, DJ Witherspoon, W Scott Watkins, C Goubert… - Mobile DNA, 2017 - Springer
Abstract Background Polymorphic human Alu elements are excellent tools for assessing
population structure, and new retrotransposition events can contribute to disease. Next …

Predicting human genes susceptible to genomic instability associated with Alu/Alu-mediated rearrangements

X Song, CR Beck, R Du, IM Campbell… - Genome …, 2018 - genome.cshlp.org
Alu elements, the short interspersed element numbering more than 1 million copies per
human genome, can mediate the formation of copy number variants (CNVs) between …

[HTML][HTML] Inverted Alu repeats unstable in yeast are excluded from the human genome

KS Lobachev, JE Stenger, OG Kozyreva, J Jurka… - The EMBO …, 2000 - embopress.org
The nearly one million Alu repeats in human chromosomes are a potential threat to genome
integrity. Alus form dense clusters where they frequently appear as inverted repeats, a …

Recently integrated Alu retrotransposons are essentially neutral residents of the human genome

R Cordaux, J Lee, L Dinoso, MA Batzer - Gene, 2006 - Elsevier
Alu elements represent the largest family of human mobile elements in copy number. A
controversial issue with implications for both Alu biology and human genome evolution is …

Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations

DJ Witherspoon, Y Zhang, J Xing, WS Watkins… - Genome …, 2013 - genome.cshlp.org
Alu retrotransposons are the most numerous and active mobile elements in humans,
causing genetic disease and creating genomic diversity. Mobile element scanning (ME …

Alu elements and DNA double-strand break repair

TB White, ME Morales, PL Deininger - Mobile Genetic Elements, 2015 - Taylor & Francis
Alu elements represent one of the most common sources of homology and homeology in the
human genome. Homeologous recombination between Alu elements represents a major …

Potential gene conversion and source genes for recently integrated Alu elements

AM Roy, ML Carroll, SV Nguyen, AH Salem… - Genome …, 2000 - genome.cshlp.org
Alu elements comprise> 10% of the human genome. We have used a computational biology
approach to analyze the human genomic DNA sequence databases to determine the impact …

TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data

C Goubert, J Thomas, LM Payer, JM Kidd… - Nucleic acids …, 2020 - academic.oup.com
Alu retrotransposons account for more than 10% of the human genome, and insertions of
these elements create structural variants segregating in human populations. Such …