Multidimensional separations-based shotgun proteomics

ML Fournier, JM Gilmore, SA Martin-Brown… - Chemical …, 2007 - ACS Publications
The proteome refers to the collection of proteins in a given biological organism or system
under a particular set of environmental conditions. The study of proteins, referred to as …

Proteomics by mass spectrometry: approaches, advances, and applications

JR Yates, CI Ruse… - Annual review of …, 2009 - annualreviews.org
Mass spectrometry (MS) is the most comprehensive and versatile tool in large-scale
proteomics. In this review, we dissect the overall framework of the MS experiment into its key …

The role of liquid chromatography in proteomics

Y Shi, R Xiang, C Horváth, JA Wilkins - Journal of Chromatography A, 2004 - Elsevier
Proteomics represents a significant challenge to separation scientists because of the
diversity and complexity of proteins and peptides present in biological systems. Mass …

Highly efficient peptide separations in proteomics: part 1. Unidimensional high performance liquid chromatography

K Sandra, M Moshir, F D'hondt, K Verleysen… - … of Chromatography B, 2008 - Elsevier
Sample complexity and dynamic range constitute enormous challenges in proteome
analysis. The back-end technology in typical proteomics platforms, namely mass …

Multi-dimensional liquid phase based separations in proteomics

H Wang, S Hanash - Journal of Chromatography B, 2003 - Elsevier
This review covers recent developments towards the implementation of multi-dimensional
(MuD) liquid phase based systems for proteome investigations. Although two-dimensional …

Quantitative proteomics: a review of different methodologies

PG Righetti, N Campostrini, J Pascali… - … Journal of Mass …, 2004 - journals.sagepub.com
The present review attempts to cover the vast array of methods which have appeared in the
last few years for performing quantitative proteome analysis. These methods are divided into …

New methods of proteome analysis: multidimensional chromatography and mass spectrometry

MP Washburn, JR Yates - Trends in Biotechnology, 2000 - cell.com
Shortcomings in two-dimensional gel electrophoresis have encouraged the search for new
methods of high-throughput proteome analysis. A variety of chromatographic methods can …

Multidimensional peptide separations in proteomics

AJ Link - Trends in Biotechnology, 2002 - cell.com
Multidimensional peptide separation will play an increasingly important role in the drive to
identify and quantitate the proteome. By increasing the peak and load capacity …

Proteomic analysis by multidimensional protein identification technology

D Nedelkov, RW Nelson, L Florens… - New and Emerging …, 2006 - Springer
Multidimensional chromatography coupled to mass spectrometry is an emerging technique
for the analysis of complex protein mixtures. One approach in this general category …

Multidimensional protein profiling technology and its application to human plasma proteome

K Fujii, T Nakano, T Kawamura, F Usui… - Journal of Proteome …, 2004 - ACS Publications
In clinical and diagnostic proteomics, it is essential to develop a comprehensive and robust
system for proteome analysis. Although multidimensional liquid chromatography/tandem …