[HTML][HTML] Toward a human blood serum proteome: analysis by multidimensional separation coupled with mass spectrometry

JN Adkins, SM Varnum, KJ Auberry, RJ Moore… - Molecular & Cellular …, 2002 - ASBMB
Blood serum is a complex body fluid that contains various proteins ranging in concentration
over at least 9 orders of magnitude. Using a combination of mass spectrometry technologies …

[HTML][HTML] Comparative and quantitative global proteomics approaches: an overview

B Deracinois, C Flahaut, S Duban-Deweer… - Proteomes, 2013 - mdpi.com
Proteomics became a key tool for the study of biological systems. The comparison between
two different physiological states allows unravelling the cellular and molecular mechanisms …

Strategies for revealing lower abundance proteins in two-dimensional protein maps

N Ahmed, GE Rice - Journal of Chromatography B, 2005 - Elsevier
One of the most challenging contemporary research endeavors is the mapping of proteins
and establishing their linkages to normal and pathological conditions. The availability of …

Comparison of three directly coupled HPLC MS/MS strategies for identification of proteins from complex mixtures: single-dimension LC-MS/MS, 2-phase MudPIT, and …

WH McDonald, R Ohi, DT Miyamoto… - International Journal of …, 2002 - Elsevier
One of the most effective methods for the direct identification of proteins from complex
mixtures without first having to resolve them by polyacrylamide gel electrophoresis is to …

Multidimensional proteomics for cell biology

M Larance, AI Lamond - Nature reviews Molecular cell biology, 2015 - nature.com
The proteome is a dynamic system in which each protein has interconnected properties—
dimensions—that together contribute to the phenotype of a cell. Measuring these properties …

Proteomic analysis of rat plasma by two-dimensional liquid chromatography and matrix-assisted laser desorption ionization time-of-flight mass spectrometry

T Linke, AC Ross, EH Harrison - Journal of Chromatography A, 2006 - Elsevier
The proteomic analysis of plasma and serum samples represents a formidable challenge
due to the presence of a few highly abundant proteins such as albumin and …

Proteomics and the analysis of proteomic data: an overview of current protein‐profiling technologies

EE Gulcicek, CM Colangelo… - Current protocols in …, 2005 - Wiley Online Library
In recent years, several proteomic methodologies have been developed that now make it
possible to identify, characterize, and comparatively quantify the relative level of expression …

Off-line multidimensional liquid chromatography and auto sampling result in sample loss in LC/LC–MS/MS

S Magdeldin, JJ Moresco, T Yamamoto… - Journal of proteome …, 2014 - ACS Publications
Large-scale proteomics often employs two orthogonal separation methods to fractionate
complex peptide mixtures. Fractionation can involve ion exchange separation coupled to …

Utilisation of proteomics datasets generated via multidimensional protein identification technology (MudPIT)

MP Washburn - Briefings in Functional Genomics, 2004 - academic.oup.com
Technological developments in proteomics have had a dramatic impact on biology in recent
years. One of these developments—named multidimensional protein identification …

Comparison of extensive protein fractionation and repetitive LC-MS/MS analyses on depth of analysis for complex proteomes

H Wang, T Chang-Wong, HY Tang… - Journal of proteome …, 2010 - ACS Publications
In-depth, reproducible coverage of complex proteomes is challenging because the
complexity of tryptic digests subjected to LC-MS/MS analysis frequently exceeds mass …