Large scale protein profiling by combination of protein fractionation and multidimensional protein identification technology (MudPIT)

EI Chen, J Hewel, B Felding-Habermann… - Molecular & Cellular …, 2006 - ASBMB
In the past decade, shotgun proteomic analysis has been utilized extensively to answer
complex biological questions. New challenges arise in large scale proteomic profiling when …

The proteome: anno Domini 2002

PG Righetti, A Castagna, F Antonucci, C Piubelli… - 2003 - degruyter.com
We present some current definitions related to functional and structural proteomics and the
human proteome, and we review the following aspects of proteome analysis: Classical 2-D …

A simplified monobuffer multidimensional chromatography for high-throughput proteome fractionation

L Guerrier, L Lomas, E Boschetti - Journal of Chromatography A, 2005 - Elsevier
The complexity of the human serum proteome is attributed to both a large dynamic range of
protein abundance, as much as 10 orders of magnitude, and a disproportionate few dozens …

Introduction to computational proteomics

J Colinge, KL Bennett - PLoS computational biology, 2007 - journals.plos.org
Proteomics is defined as the protein complement of the genome and involves the complete
analysis of all the proteins in a given sample [1, 2]. Several technologies are involved, and …

Quantitative profiling of proteins in complex mixtures using liquid chromatography and mass spectrometry

D Chelius, PV Bondarenko - Journal of proteome research, 2002 - ACS Publications
The objective of this study was to determine if liquid chromatography mass spectrometry
(LC/MS) data of tryptic digests of proteins can be used for quantitation. In theory, the peak …

Review of three-dimensional liquid chromatography platforms for bottom-up proteomics

VA Duong, JM Park, H Lee - International Journal of Molecular Sciences, 2020 - mdpi.com
Proteomics is a large-scale study of proteins, aiming at the description and characterization
of all expressed proteins in biological systems. The expressed proteins are typically highly …

Separation of serum and plasma proteins for in-depth proteomic analysis

J Paul, TD Veenstra - Separations, 2022 - mdpi.com
There are probably no biological samples that did more to spur interest in proteomics than
serum and plasma. The belief was that comparing the proteomes of these samples obtained …

[图书][B] Introducing proteomics: from concepts to sample separation, mass spectrometry and data analysis

J Lovric - 2011 - books.google.com
Introducing Proteomics gives a concise and coherent overview of every aspect of current
proteomics technology, which is a rapidly developing field that is having a major impact …

Evaluation of reproducibility of protein identification results after multidimensional human serum protein separation

D Stalder, A Haeberli, M Heller - Proteomics, 2008 - Wiley Online Library
We developed a gel‐and label‐free proteomics platform for comparative studies of human
serum. The method involves the depletion of the six most abundant proteins, protein …

[PDF][PDF] MudPIT: multidimensional protein identification technology

CM Delahunty, JR Yates 3rd - Biotechniques, 2007 - ufpel.edu.br
Multidimensional protein identification technology (MudPIT)(1) developed as a method to
analyze the highly complex samples necessary for large-scale proteome analysis by …