Instruments and methods in proteomics

C May, F Brosseron, P Chartowski… - Data Mining in …, 2011 - Springer
In the past decade, major developments in instrumentation and methodology have been
achieved in proteomics. For proteome investigations of complex biological samples derived …

[PDF][PDF] Proteomic approaches in biological and medical sciences: principles and applications

P Conrotto, S Souchelnytskyi - Experimental oncology, 2008 - dspace.nbuv.gov.ua
After the first introduction of the concept of “proteome” more than 10 years ago, large-scale
studies of protein expression, localization, activities and interactions have gained an …

Evaluation of three‐dimensional gel electrophoresis to improve quantitative profiling of complex proteomes

B Colignon, M Raes, M Dieu, E Delaive, S Mauro - Proteomics, 2013 - Wiley Online Library
Two‐dimensional remains one of the main experimental approaches in proteome analysis.
However, comigration of protein leads to several limitations: lack of accuracy in protein …

Proteomics: the deciphering of the functional genome

LR Yu, NA Stewart, TD Veenstra - Essentials of genomic and personalized …, 2010 - Elsevier
Publisher Summary Proteomics is the analysis of the entire protein complement of a cell,
tissue, or organism under a specific, defined set of conditions. In its present state, it is …

Trends in sample preparation for classical and second generation proteomics

B Cañas, C Piñeiro, E Calvo, D López-Ferrer… - … of chromatography A, 2007 - Elsevier
Sample preparation is a fundamental step in the proteomics workflow. However, it is not
easy to find compiled information updating this subject. In this paper, the strategies and …

The application of quantification techniques in proteomics for biomedical research

E Rodríguez‐Suárez, AD Whetton - Mass spectrometry reviews, 2013 - Wiley Online Library
The systematic analysis of biological processes requires an understanding of the
quantitative expression patterns of proteins, their interacting partners and their subcellular …

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC− MS/MS) for large-scale protein analysis: the yeast proteome

J Peng, JE Elias, CC Thoreen… - Journal of proteome …, 2003 - ACS Publications
Highly complex protein mixtures can be directly analyzed after proteolysis by liquid
chromatography coupled with tandem mass spectrometry (LC− MS/MS). In this paper, we …

Proteomics without polyacrylamide: qualitative and quantitative uses of tandem mass spectrometry in proteome analysis

DR Goodlett, EC Yi - Functional & integrative genomics, 2002 - Springer
Proteomics can be thought of as an attempt to understand the information encoded in
genomic sequences from the perspective of proteins; ie the structure, function and regulation …

Comprehensive two-dimensional high-performance liquid chromatography for the isolation of overexpressed proteins and proteome mapping

GJ Opiteck, SM Ramirez, JW Jorgenson… - Analytical …, 1998 - Elsevier
A two-dimensional liquid chromatographic system is described here which uses size-
exclusion liquid chromatography (SEC) followed by reversed-phase liquid chromatography …

Proteome profile of human urine with two‐dimensional liquid phase fractionation

M Soldi, C Sarto, C Valsecchi, F Magni… - …, 2005 - Wiley Online Library
Two‐dimensional liquid chromatography separation (2‐DL), based on chromatofocusing for
first dimension and hydrophobicity for second, can be used as a complementary method to …