Deep learning and generative methods in cheminformatics and chemical biology: navigating small molecule space intelligently

DB Kell, S Samanta, N Swainston - Biochemical Journal, 2020 - portlandpress.com
The number of 'small'molecules that may be of interest to chemical biologists—chemical
space—is enormous, but the fraction that have ever been made is tiny. Most strategies are …

[HTML][HTML] Exploring chemical space—Generative models and their evaluation

M Vogt - Artificial Intelligence in the Life Sciences, 2023 - Elsevier
Recent advances in the field of artificial intelligence, specifically regarding deep learning
methods, have invigorated research into novel ways for the exploration of chemical space …

Deep learning for computational chemistry

GB Goh, NO Hodas, A Vishnu - Journal of computational …, 2017 - Wiley Online Library
The rise and fall of artificial neural networks is well documented in the scientific literature of
both computer science and computational chemistry. Yet almost two decades later, we are …

Deep learning in chemistry

AC Mater, ML Coote - Journal of chemical information and …, 2019 - ACS Publications
Machine learning enables computers to address problems by learning from data. Deep
learning is a type of machine learning that uses a hierarchical recombination of features to …

Autonomous molecular design: then and now

T Dimitrov, C Kreisbeck, JS Becker… - … applied materials & …, 2019 - ACS Publications
The success of deep machine learning in processing of large amounts of data, for example,
in image or voice recognition and generation, raises the possibilities that these tools can …

[HTML][HTML] FragNet, a contrastive learning-based transformer model for clustering, interpreting, visualizing, and navigating chemical space

AD Shrivastava, DB Kell - Molecules, 2021 - mdpi.com
The question of molecular similarity is core in cheminformatics and is usually assessed via a
pairwise comparison based on vectors of properties or molecular fingerprints. We recently …

[图书][B] Machine Learning in Chemistry

JP Janet, HJ Kulik - 2020 - books.google.com
Recent advances in machine learning or artificial intelligence for vision and natural
language processing that have enabled the development of new technologies such as …

Machine learning the ropes: principles, applications and directions in synthetic chemistry

F Strieth-Kalthoff, F Sandfort, MHS Segler… - Chemical Society …, 2020 - pubs.rsc.org
Machine learning (ML) has emerged as a general, problem-solving paradigm with many
applications in computer vision, natural language processing, digital safety, or medicine. By …

Combining machine learning and computational chemistry for predictive insights into chemical systems

JA Keith, V Vassilev-Galindo, B Cheng… - Chemical …, 2021 - ACS Publications
Machine learning models are poised to make a transformative impact on chemical sciences
by dramatically accelerating computational algorithms and amplifying insights available from …

[HTML][HTML] Deep learning for molecules and materials

AD White - Living journal of computational molecular science, 2022 - ncbi.nlm.nih.gov
Deep learning is becoming a standard tool in chemistry and materials science. Although
there are learning materials available for deep learning, none cover the applications in …