Ancient Gene Duplicates in Gossypium (Cotton) Exhibit Near-Complete Expression Divergence

S Renny-Byfield, JP Gallagher… - Genome biology and …, 2014 - academic.oup.com
Whole genome duplication (WGD) is widespread in flowering plants and is a driving force in
angiosperm diversification. The redundancy introduced by WGD allows the evolution of …

Genetic and epigenetic divergence of duplicate genes in two legume species

C Xu, BD Nadon, KD Kim… - Plant, cell & environment, 2018 - Wiley Online Library
Soybean (Glycine max) and common bean (Phaseolus vulgaris) share a polyploidy event~
59 MYA, followed by a Glycine‐specific whole genome duplication (WGD)~ 8–13 MYA …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

Rapid functional divergence after small-scale gene duplication in grasses

X Jiang, R Assis - BMC Evolutionary Biology, 2019 - Springer
Background Gene duplication has played an important role in the evolution and
domestication of flowering plants. Yet little is known about how plant duplicate genes evolve …

Evolution of gene duplication in plants

N Panchy, M Lehti-Shiu, SH Shiu - Plant physiology, 2016 - academic.oup.com
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …

[HTML][HTML] Comparative analysis of Gossypium and Vitis genomes indicates genome duplication specific to the Gossypium lineage

L Lin, H Tang, RO Compton, C Lemke, LK Rainville… - Genomics, 2011 - Elsevier
Genetic mapping studies have suggested that diploid cotton (Gossypium) might be an
ancient polyploid. However, further evidence is lacking due to the complexity of the genome …

Expression Partitioning of Duplicate Genes at Single Cell Resolution in Arabidopsis Roots

JE Coate, AD Farmer, JW Schiefelbein… - Frontiers in …, 2020 - frontiersin.org
Gene duplication is a key evolutionary phenomenon, prevalent in all organisms but
particularly so in plants, where whole genome duplication (WGD; polyploidy) is a major force …

PGDD: a database of gene and genome duplication in plants

TH Lee, H Tang, X Wang, AH Paterson - Nucleic acids research, 2012 - academic.oup.com
Genome duplication (GD) has permanently shaped the architecture and function of many
higher eukaryotic genomes. The angiosperms (flowering plants) are outstanding models in …

Pervasive genome duplications across the plant tree of life and their links to major evolutionary innovations and transitions

X Qiao, S Zhang, AH Paterson - Computational and structural …, 2022 - Elsevier
Whole-genome duplication (WGD) has occurred repeatedly during plant evolution and
diversification, providing genetic layers for evolving new functions and phenotypes …

Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants

W Jiang, Y Liu, E Xia, L Gao - Plant physiology, 2013 - academic.oup.com
The evolution of genes and genomes after polyploidization has been the subject of
extensive studies in evolutionary biology and plant sciences. While a significant number of …