RNA‐directed DNA methylation requires stepwise binding of silencing factors to long non‐coding RNA

G Böhmdorfer, MJ Rowley, J Kuciński, Y Zhu… - The Plant …, 2014 - Wiley Online Library
Ribonucleic acid‐mediated transcriptional gene silencing (known as RNA‐directed DNA
methylation, or Rd DM, in A rabidopsis thaliana) is important for influencing gene expression …

A protein complex required for polymerase V transcripts and RNA-directed DNA methylation in Arabidopsis

JA Law, I Ausin, LM Johnson, AA Vashisht, JK Zhu… - Current Biology, 2010 - cell.com
DNA methylation is an epigenetic modification associated with gene silencing. In
Arabidopsis, DNA methylation is established by DOMAINS REARRANGED …

RNA-directed DNA methylation mediated by DRD1 and Pol IVb: a versatile pathway for transcriptional gene silencing in plants

B Huettel, T Kanno, L Daxinger, E Bucher… - … et Biophysica Acta (BBA …, 2007 - Elsevier
RNA-directed DNA methylation, which is one of several RNAi-mediated pathways in the
nucleus, has been highly elaborated in the plant kingdom. RNA-directed DNA methylation …

RNA-directed DNA methylation in plants: Where to start?

H Zhang, X He, JK Zhu - RNA biology, 2013 - Taylor & Francis
Plants use 24-nucleotide small interfering RNAs (24-nt siRNAs) and long non-coding RNAs
(lncRNAs) to direct de novo DNA methylation and transcriptional gene silencing. This …

RNA polymerase V targets transcriptional silencing components to promoters of protein‐coding genes

Q Zheng, MJ Rowley, G Böhmdorfer… - The Plant …, 2013 - Wiley Online Library
Transcriptional gene silencing controls transposons and other repetitive elements through
RNA‐directed DNA methylation (R d DM) and heterochromatin formation. A key component …

Long-range control of gene expression via RNA-directed DNA methylation

MJ Rowley, MH Rothi, G Böhmdorfer, J Kuciński… - PLoS …, 2017 - journals.plos.org
RNA-mediated transcriptional silencing, in plants known as RNA-directed DNA methylation
(RdDM), is a conserved process where small interfering RNA (siRNA) and long non-coding …

Non-coding RNA transcription and RNA-directed DNA methylation in Arabidopsis

XJ He, ZY Ma, ZW Liu - Molecular plant, 2014 - cell.com
ABSTRACT RNA-directed DNA methylation (RdDM) is responsible for transcriptional
silencing of endogenous transposable elements and introduced transgenes. This process …

Use of forward genetic screens to identify genes required for RNA-directed DNA methylation in Arabidopsis thaliana

C Eun, ZJ Lorkovic, T Sasaki… - Cold Spring Harbor …, 2012 - symposium.cshlp.org
RNA-directed DNA methylation is a small RNA-mediated epigenetic modification that
contributes to transcriptional silencing of transposons and repetitive sequences in plants …

The ability to form homodimers is essential for RDM1 to function in RNA-directed DNA methylation

T Sasaki, ZJ Lorković, SC Liang, AJM Matzke… - PloS one, 2014 - journals.plos.org
RDM1 (RNA-DIRECTED DNA METHYLATION1) is a small plant-specific protein required for
RNA-directed DNA methylation (RdDM). RDM1 interacts with RNA polymerase II (Pol II) …

Endogenous targets of RNA‐directed DNA methylation and Pol IV in Arabidopsis

B Huettel, T Kanno, L Daxinger, W Aufsatz… - The EMBO …, 2006 - embopress.org
DRD1 is a SWI/SNF‐like protein that cooperates with a plant‐specific RNA polymerase, Pol
IVb, to facilitate RNA‐directed de novo methylation and silencing of homologous DNA …