On the misleading use of for QSAR model comparison

V Consonni, R Todeschini, D Ballabio… - Molecular …, 2019 - Wiley Online Library
Abstract Quantitative Structure–Activity Relationship (QSAR) models play a central role in
medicinal chemistry, toxicology and computer‐assisted molecular design, as well as a …

[HTML][HTML] On two novel parameters for validation of predictive QSAR models

P Pratim Roy, S Paul, I Mitra, K Roy - Molecules, 2009 - mdpi.com
Validation is a crucial aspect of quantitative structure–activity relationship (QSAR) modeling.
The present paper shows that traditionally used validation parameters (leave-one-out Q 2 for …

Experimental errors in QSAR modeling sets: what we can do and what we cannot do

L Zhao, W Wang, A Sedykh, H Zhu - ACS omega, 2017 - ACS Publications
Numerous chemical data sets have become available for quantitative structure–activity
relationship (QSAR) modeling studies. However, the quality of different data sources may be …

The effect of noise on the predictive limit of QSAR models

SS Kolmar, CM Grulke - Journal of Cheminformatics, 2021 - Springer
A key challenge in the field of Quantitative Structure Activity Relationships (QSAR) is how to
effectively treat experimental error in the training and evaluation of computational models. It …

[HTML][HTML] Reliably assessing prediction reliability for high dimensional QSAR data

J Huang, X Fan - Molecular diversity, 2013 - Springer
Predictability and prediction reliability are of utmost important to characterize a good
Quantitative structure–activity relationships (QSAR) model. However, validation methods are …

Enhanced QSAR model performance by integrating structural and gene expression information

Q Chen, L Wu, W Liu, L Xing, X Fan - Molecules, 2013 - mdpi.com
Despite decades of intensive research and a number of demonstrable successes,
quantitative structure-activity relationship (QSAR) models still fail to yield predictions with …

Prediction reliability of QSAR models: an overview of various validation tools

P De, S Kar, P Ambure, K Roy - Archives of Toxicology, 2022 - Springer
The reliability of any quantitative structure–activity relationship (QSAR) model depends on
multiple aspects such as the accuracy of the input dataset, selection of significant …

On the use of the metric rm 2 as an effective tool for validation of QSAR models in computational drug design and predictive toxicology

K Roy, I Mitra - Mini Reviews in Medicinal Chemistry, 2012 - ingentaconnect.com
Validation of quantitative structure-activity relationship (QSAR) models plays a key role for
the selection of robust and predictive models that may be employed for further activity …

How to judge predictive quality of classification and regression based QSAR models?

K Roy, S Kar - Frontiers in computational chemistry, 2015 - Elsevier
Quantitative structure-activity relationship (QSAR) is a statistical modelling approach that
can be used in drug discovery, environmental fate modeling, property and activity prediction …

Towards the revival of interpretable QSAR models

W Shoombuatong, P Prathipati, W Owasirikul… - Advances in QSAR …, 2017 - Springer
Quantitative structure-activity relationship (QSAR) has been instrumental in aiding medicinal
chemists and physical scientists in understanding how modification of substituents at …