CRISPR-ERA: a comprehensive design tool for CRISPR-mediated gene editing, repression and activation

H Liu, Z Wei, A Dominguez, Y Li, X Wang, LS Qi - Bioinformatics, 2015 - academic.oup.com
The CRISPR/Cas9 system was recently developed as a powerful and flexible technology for
targeted genome engineering, including genome editing (altering the genetic sequence) …

Updates on gene editing and its applications

H Puchta, J Jiang, K Wang, Y Zhao - Plant Physiology, 2022 - academic.oup.com
Recent advancements in gene editing provide unprecedented tools for plant biology
research and offer unlimited potential for improving existing crops and de novo …

Expanding the CRISPR toolbox in zebrafish for studying development and disease

K Liu, C Petree, T Requena, P Varshney… - Frontiers in cell and …, 2019 - frontiersin.org
The study of model organisms has revolutionized our understanding of the mechanisms
underlying normal development, adult homeostasis, and human disease. Much of what we …

Generalizable sgRNA design for improved CRISPR/Cas9 editing efficiency

K Hiranniramol, Y Chen, W Liu, X Wang - Bioinformatics, 2020 - academic.oup.com
Motivation The development of clustered regularly interspaced short palindromic repeat
(CRISPR)/CRISPR-associated protein 9 (Cas9) technology has provided a simple yet …

Expanding plant genome-editing scope by an engineered iSpyMacCas9 system that targets A-rich PAM sequences

S Sretenovic, D Yin, A Levav, JD Selengut… - Plant …, 2021 - cell.com
The most popular CRISPR-SpCas9 system recognizes canonical NGG protospacer adjacent
motifs (PAMs). Previously engineered SpCas9 variants, such as Cas9-NG, favor G-rich …

Editing plant genomes with CRISPR/Cas9

K Belhaj, A Chaparro-Garcia, S Kamoun… - Current opinion in …, 2015 - Elsevier
Highlights•Cas9 is an RNA-guided DNA endonuclease innate to prokaryotic immune
systems.•CRISPR/Cas9 has recently emerged as a powerful genome editing …

CRISPR-Cas guides the future of genetic engineering

GJ Knott, JA Doudna - Science, 2018 - science.org
The diversity, modularity, and efficacy of CRISPR-Cas systems are driving a
biotechnological revolution. RNA-guided Cas enzymes have been adopted as tools to …

Targeted gene manipulation in plants using the CRISPR/Cas technology

D Zhang, Z Li, JF Li - Journal of Genetics and Genomics, 2016 - Elsevier
The CRISPR/Cas technology is emerging as a revolutionary genome editing tool in diverse
organisms including plants, and has quickly evolved into a suite of versatile tools for …

Systematic optimization of Cas12a base editors in wheat and maize using the ITER platform

C Gaillochet, A Peña Fernández, V Goossens… - Genome biology, 2023 - Springer
Background Testing an ever-increasing number of CRISPR components is challenging
when developing new genome engineering tools. Plant biotechnology has few high …

Genome editing in animals with minimal PAM CRISPR-Cas9 enzymes

J Vicencio, C Sánchez-Bolaños… - Nature …, 2022 - nature.com
The requirement for Cas nucleases to recognize a specific PAM is a major restriction for
genome editing. SpCas9 variants SpG and SpRY, recognizing NGN and NRN PAMs …