SNRMPACDC: computational model focused on Siamese network and random matrix projection for anticancer synergistic drug combination prediction

TH Li, CC Wang, L Zhang, X Chen - Briefings in Bioinformatics, 2023 - academic.oup.com
Synergistic drug combinations can improve the therapeutic effect and reduce the drug
dosage to avoid toxicity. In previous years, an in vitro approach was utilized to screen …

Predicting synergistic anticancer drug combination based on low-rank global attention mechanism and bilinear predictor

Y Gan, X Huang, W Guo, C Yan, G Zou - Bioinformatics, 2023 - academic.oup.com
Motivation Drug combination therapy has exhibited remarkable therapeutic efficacy and has
gradually become a promising clinical treatment strategy of complex diseases such as …

Prediction of synergistic anti-cancer drug combinations based on drug target network and drug induced gene expression profiles

X Li, Y Xu, H Cui, T Huang, D Wang, B Lian, W Li… - Artificial intelligence in …, 2017 - Elsevier
Objective Synergistic drug combinations are promising therapies for cancer treatment.
However, effective prediction of synergistic drug combinations is quite challenging as …

An enhanced cascade-based deep forest model for drug combination prediction

W Lin, L Wu, Y Zhang, Y Wen, B Yan… - Briefings in …, 2022 - academic.oup.com
Combination therapy has shown an obvious curative effect on complex diseases, whereas
the search space of drug combinations is too large to be validated experimentally even with …

GraphSynergy: a network-inspired deep learning model for anticancer drug combination prediction

J Yang, Z Xu, WKK Wu, Q Chu… - Journal of the American …, 2021 - academic.oup.com
Objective To develop an end-to-end deep learning framework based on a protein–protein
interaction (PPI) network to make synergistic anticancer drug combination predictions …

DeepSynergy: predicting anti-cancer drug synergy with Deep Learning

K Preuer, RPI Lewis, S Hochreiter, A Bender… - …, 2018 - academic.oup.com
Motivation While drug combination therapies are a well-established concept in cancer
treatment, identifying novel synergistic combinations is challenging due to the size of …

In-silico prediction of synergistic anti-cancer drug combinations using multi-omics data

R Celebi, O Bear Don't Walk IV, R Movva, S Alpsoy… - Scientific Reports, 2019 - nature.com
Chemotherapy is a routine treatment approach for early-stage cancers, but the effectiveness
of such treatments is often limited by drug resistance, toxicity, and tumor heterogeneity …

DeepTraSynergy: drug combinations using multimodal deep learning with transformers

F Rafiei, H Zeraati, K Abbasi, JB Ghasemi… - …, 2023 - academic.oup.com
Motivation Screening bioactive compounds in cancer cell lines receive more attention.
Multidisciplinary drugs or drug combinations have a more effective role in treatments and …

DTSyn: a dual-transformer-based neural network to predict synergistic drug combinations

J Hu, J Gao, X Fang, Z Liu, F Wang… - Briefings in …, 2022 - academic.oup.com
Drug combination therapies are superior to monotherapy for cancer treatment in many ways.
Identifying novel drug combinations by screening is challenging for the wet-lab experiments …

PRODeepSyn: predicting anticancer synergistic drug combinations by embedding cell lines with protein–protein interaction network

X Wang, H Zhu, Y Jiang, Y Li, C Tang… - Briefings in …, 2022 - academic.oup.com
Although drug combinations in cancer treatment appear to be a promising therapeutic
strategy with respect to monotherapy, it is arduous to discover new synergistic drug …