What has QTL mapping taught us about plant domestication?

AH Paterson - New Phytologist, 2002 - Wiley Online Library
The aim of this paper is to survey the general area of quantitative trait locus (QTL) mapping,
and its specific impact on current understanding of plant domestication. Plant domestication …

[HTML][HTML] The Chrysanthemum nankingense genome provides insights into the evolution and diversification of chrysanthemum flowers and medicinal traits

C Song, Y Liu, A Song, G Dong, H Zhao, W Sun… - Molecular Plant, 2018 - cell.com
Abstract The Asteraceae (Compositae), a large plant family of approximately 24 000–35 000
species, accounts for∼ 10% of all angiosperm species and contributes a lot to plant …

[HTML][HTML] Two evolutionary histories in the genome of rice: the roles of domestication genes

Z He, W Zhai, H Wen, T Tang, Y Wang, X Lu… - PLoS …, 2011 - journals.plos.org
Genealogical patterns in different genomic regions may be different due to the joint influence
of gene flow and selection. The existence of two subspecies of cultivated rice provides a …

A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity

J Qi, X Liu, DI Shen, H Miao, B Xie, X Li, P Zeng… - Nature …, 2013 - nature.com
Most fruits in our daily diet are the products of domestication and breeding. Here we report a
map of genome variation for a major fruit that encompasses∼ 3.6 million variants, generated …

Massive haplotypes underlie ecotypic differentiation in sunflowers

M Todesco, GL Owens, N Bercovich, JS Légaré… - Nature, 2020 - nature.com
Species often include multiple ecotypes that are adapted to different environments.
However, it is unclear how ecotypes arise and how their distinctive combinations of adaptive …

A 3,000-year-old Egyptian emmer wheat genome reveals dispersal and domestication history

MF Scott, LR Botigué, S Brace, CJ Stevens, VE Mullin… - Nature plants, 2019 - nature.com
Tetraploid emmer wheat (Triticum turgidum ssp. dicoccon) is a progenitor of the world's most
widely grown crop, hexaploid bread wheat (Triticum aestivum), as well as the direct ancestor …

[HTML][HTML] Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

JC Stein, Y Yu, D Copetti, DJ Zwickl, L Zhang… - Nature …, 2018 - nature.com
The genus Oryza is a model system for the study of molecular evolution over time scales
ranging from a few thousand to 15 million years. Using 13 reference genomes spanning the …

Quantitative trait loci associated with seed and seedling traits in Lactuca

J Argyris, MJ Truco, O Ochoa, SJ Knapp… - Theoretical and Applied …, 2005 - Springer
Seed and seedling traits related to germination and stand establishment are important in the
production of cultivated lettuce (Lactuca sativa L.). Six seed and seedling traits segregating …

[HTML][HTML] Fine definition of the pedigree haplotypes of closely related rice cultivars by means of genome-wide discovery of single-nucleotide polymorphisms

T Yamamoto, H Nagasaki, J Yonemaru, K Ebana… - BMC genomics, 2010 - Springer
Background To create useful gene combinations in crop breeding, it is necessary to clarify
the dynamics of the genome composition created by breeding practices. A large quantity of …

[HTML][HTML] Patterns of Polymorphism and Demographic History in Natural Populations of Arabidopsis lyrata

J Ross-Ibarra, SI Wright, JP Foxe, A Kawabe… - PloS one, 2008 - journals.plos.org
Background Many of the processes affecting genetic diversity act on local populations.
However, studies of plant nucleotide diversity have largely ignored local sampling, making it …