EMDB—the electron microscopy data bank

Nucleic acids research, 2024 - academic.oup.com
Abstract The Electron Microscopy Data Bank (EMDB) is the global public archive of three-
dimensional electron microscopy (3DEM) maps of biological specimens derived from …

[HTML][HTML] SIMPLE 3.0. Stream single-particle cryo-EM analysis in real time

J Caesar, CF Reboul, C Machello, S Kiesewetter… - Journal of structural …, 2020 - Elsevier
We here introduce the third major release of the SIMPLE (Single-particle IMage Processing
Linux Engine) open-source software package for analysis of cryogenic transmission electron …

[HTML][HTML] Advances in cryo-electron tomography for biology and medicine

RI Koning, AJ Koster, TH Sharp - Annals of Anatomy-Anatomischer …, 2018 - Elsevier
Cryo-electron tomography (CET) utilizes a combination of specimen cryo-fixation and multi-
angle electron microscopy imaging to produce three-dimensional (3D) volume …

[HTML][HTML] MRC2014: Extensions to the MRC format header for electron cryo-microscopy and tomography

A Cheng, R Henderson, D Mastronarde… - Journal of structural …, 2015 - Elsevier
The MRC binary file format is widely used in the three-dimensional electron microscopy field
for storing image and volume data. Files contain a header which describes the kind of data …

Cryo-EM in molecular and cellular biology

HR Saibil - Molecular Cell, 2022 - cell.com
This review summarizes the current state of methods and results achievable by cryo-electron
microscopy (cryo-EM) imaging for molecular, cell, and structural biologists who wish to …

The EM program package: a platform for image processing in biological electron microscopy

R Hegerl - Journal of structural biology, 1996 - Elsevier
EM is a software package developed for image processing in the field of biological electron
microscopy. After a brief summary of its history, an outline of the package is given, by …

[PDF][PDF] CryoEM at 100 keV: a demonstration and prospects

K Naydenova, G McMullan, MJ Peet, Y Lee… - IUCrJ, 2019 - journals.iucr.org
100 kV is investigated as the operating voltage for single-particle electron cryomicroscopy
(cryoEM). Reducing the electron energy from the current standard of 300 or 200 keV offers …

COSMIC2: A science gateway for cryo-electron microscopy structure determination

MA Cianfrocco, M Wong-Barnum, C Youn… - Proceedings of the …, 2017 - dl.acm.org
1 Structural biology is in the midst of a revolution. Instrumentation and software
improvements have allowed for the full realization of cryo-electron microscopy (cryo-EM) as …

[HTML][HTML] Recent advances and current trends in cryo-electron microscopy

M Guaita, SC Watters, S Loerch - Current opinion in structural biology, 2022 - Elsevier
All steps of cryogenic electron-microscopy (cryo-EM) workflows have rapidly evolved over
the last decade. Advances in both single-particle analysis (SPA) cryo-EM and cryo-electron …

[HTML][HTML] An introduction to sample preparation and imaging by cryo-electron microscopy for structural biology

RF Thompson, M Walker, CA Siebert, SP Muench… - Methods, 2016 - Elsevier
Transmission electron microscopy (EM) is a versatile technique that can be used to image
biological specimens ranging from intact eukaryotic cells to individual proteins> 150 kDa …