Computational design of peptide ligands
Peptides possess several attractive features when compared to small molecule and protein
therapeutics, such as high structural compatibility with target proteins, the ability to disrupt …
therapeutics, such as high structural compatibility with target proteins, the ability to disrupt …
Computational peptidology: a new and promising approach to therapeutic peptide design
The recent focus on protein-protein interaction networks has increasingly been shifted
towards the disruption of protein complexes, which either are mediated by the binding of a …
towards the disruption of protein complexes, which either are mediated by the binding of a …
Recapitulation and design of protein binding peptide structures and sequences
An important objective of computational protein design is the generation of high affinity
peptide inhibitors of protein–peptide interactions, both as a precursor to the development of …
peptide inhibitors of protein–peptide interactions, both as a precursor to the development of …
[HTML][HTML] Targeting Protein–Protein Interfaces with Peptides: The Contribution of Chemical Combinatorial Peptide Library Approaches
Protein–protein interfaces play fundamental roles in the molecular mechanisms underlying
pathophysiological pathways and are important targets for the design of compounds of …
pathophysiological pathways and are important targets for the design of compounds of …
Peptidic modulators of protein‐protein interactions: progress and challenges in computational design
M Rubinstein, MY Niv - Biopolymers: Original Research on …, 2009 - Wiley Online Library
With the decline in productivity of drug‐development efforts, novel approaches to rational
drug design are being introduced and developed. Naturally occurring and synthetic peptides …
drug design are being introduced and developed. Naturally occurring and synthetic peptides …
[HTML][HTML] A comprehensive review on current advances in peptide drug development and design
Protein–protein interactions (PPIs) execute many fundamental cellular functions and have
served as prime drug targets over the last two decades. Interfering intracellular PPIs with …
served as prime drug targets over the last two decades. Interfering intracellular PPIs with …
[HTML][HTML] Protein–peptide docking: opportunities and challenges
Highlights•We provide an overview of protein-peptide docking methods and their
applications.•Peptide docking tools can be divided on template-based, local and global …
applications.•Peptide docking tools can be divided on template-based, local and global …
[HTML][HTML] Towards rational computational peptide design
Peptides are prevalent in biology, mediating as many as 40% of protein-protein interactions,
and involved in other cellular functions such as transport and signaling. Their ability to bind …
and involved in other cellular functions such as transport and signaling. Their ability to bind …
Peptide docking and structure-based characterization of peptide binding: from knowledge to know-how
Highlights•Accrual of peptide–protein complex structures allowed their detailed
characterization.•This has lead to rapid progress in peptide docking, based on diverse …
characterization.•This has lead to rapid progress in peptide docking, based on diverse …
[HTML][HTML] Bioinformatics and biosimulations as toolbox for peptides and peptidomimetics design: where are we?
Peptides and peptidomimetics are strongly re-emerging as amenable candidates in the
development of therapeutic strategies against a plethora of pathologies. In particular, these …
development of therapeutic strategies against a plethora of pathologies. In particular, these …