Pathogenetic profiling of COVID-19 and SARS-like viruses

Z Nain, HK Rana, P Liò, SMS Islam… - Briefings in …, 2021 - academic.oup.com
Abstract The novel coronavirus (2019-nCoV) has recently emerged, causing COVID-19
outbreaks and significant societal/global disruption. Importantly, COVID-19 infection …

Molecular epidemiology surveillance of SARS-CoV-2: mutations and genetic diversity one year after emerging

A Flores-Alanis, A Cruz-Rangel, F Rodríguez-Gómez… - Pathogens, 2021 - mdpi.com
In December 2019, the first cases of the novel severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) were identified in the city of Wuhan, China. Since then, it has …

Genomic diversity and hotspot mutations in 30,983 SARS-CoV-2 genomes: moving toward a universal vaccine for the “confined virus”?

T Alouane, M Laamarti, A Essabbar, M Hakmi… - Pathogens, 2020 - mdpi.com
The COVID-19 pandemic has been ongoing since its onset in late November 2019 in
Wuhan, China. Understanding and monitoring the genetic evolution of the virus, its …

Evolution of the SARS-CoV-2 genome and emergence of variants of concern

I Safari, E Elahi - Archives of virology, 2022 - Springer
The high transmission and mortality rates associated with SARS-CoV-2 have led to tragic
consequences worldwide. Large-scale whole-genome sequencing of the SARS-CoV-2 …

[PDF][PDF] A benchmarking study of SARS-CoV-2 whole-genome sequencing protocols using COVID-19 patient samples

T Liu, Z Chen, W Chen, X Chen, M Hosseini, Z Yang… - IScience, 2021 - cell.com
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is an emerging new type of
coronavirus that is responsible for the COVID-19 pandemic and the unprecedented global …

COVID-19 CG enables SARS-CoV-2 mutation and lineage tracking by locations and dates of interest

AT Chen, K Altschuler, SH Zhan, YA Chan… - Elife, 2021 - elifesciences.org
COVID-19 CG (covidcg. org) is an open resource for tracking SARS-CoV-2 single-nucleotide
variations (SNVs), lineages, and clades using the virus genomes on the GISAID database …