[HTML][HTML] H-NS can facilitate specific DNA-binding by RNA polymerase in AT-rich gene regulatory regions
SS Singh, DC Grainger - PLoS genetics, 2013 - journals.plos.org
Extremely AT-rich DNA sequences present a challenging template for specific recognition by
RNA polymerase. In bacteria, this is because the promoter− 10 hexamer, the major DNA …
RNA polymerase. In bacteria, this is because the promoter− 10 hexamer, the major DNA …
The osmZ (bglY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K12 nucleoid
G May, P Dersch, M Haardt, A Middendorf… - Molecular and General …, 1990 - Springer
A class of trans-acting mutations, which alter the osmoregulated expression of the
Escherichia coli proU operon, maps at 27 min on the chromosome in a locus we have called …
Escherichia coli proU operon, maps at 27 min on the chromosome in a locus we have called …
High-affinity DNA binding of HU protein from the hyperthermophile Thermotoga maritima
Prokaryotic genomes are compacted by association with small basic proteins, generating
what has been termed bacterial chromatin. The ubiquitous DNA-binding protein HU serves …
what has been termed bacterial chromatin. The ubiquitous DNA-binding protein HU serves …
H-NS: a universal regulator for a dynamic genome
CJ Dorman - Nature Reviews Microbiology, 2004 - nature.com
The effect of the bacterial heat-stable nucleoid-structuring (H-NS) protein on gene
expression is overwhelmingly negative and extends throughout the genome, pointing to an …
expression is overwhelmingly negative and extends throughout the genome, pointing to an …
Common fold in helix–hairpin–helix proteins
X Shao, NV Grishin - Nucleic acids research, 2000 - academic.oup.com
Abstract Helix–hairpin–helix (HhH) is a widespread motif involved in non-sequence-specific
DNA binding. The majority of HhH motifs function as DNA-binding modules, however, some …
DNA binding. The majority of HhH motifs function as DNA-binding modules, however, some …
HU‐α binds to the putative double‐stranded DNA mimic HI1450 from Haemophilus influenzae
LM Parsons, F Liu, J Orban - Protein science, 2005 - Wiley Online Library
Recently, the solution structure of the hypothetical protein HI1450 from Haemophilus
influenzae was solved as part of a structure‐based effort to understand function. The …
influenzae was solved as part of a structure‐based effort to understand function. The …
Characterization of the binding of HU and IHF, homologous histone-like proteins of Escherichia coli, to curved and uncurved DNA
M Shimizu, M Miyake, F Kanke, U Matsumoto… - … et Biophysica Acta (BBA …, 1995 - Elsevier
The binding of E. coli histone-like protein HU to curved and uncurved DNA fragments
containing adenine tracts was characterized by relative binding affinity assay, and compared …
containing adenine tracts was characterized by relative binding affinity assay, and compared …
[HTML][HTML] EbfC/YbaB: a widely distributed nucleoid-associated protein in prokaryotes
Genomic compaction is an essential characteristic of living organisms. Nucleoid-associated
proteins (NAPs) are a group of small proteins that play crucial roles in chromosome …
proteins (NAPs) are a group of small proteins that play crucial roles in chromosome …
Escherichia coli Histone-Like Protein H-NS Preferentially Binds to Horizontally Acquired DNA in Association with RNA Polymerase
T Oshima, S Ishikawa, K Kurokawa, H Aiba… - DNA …, 2006 - academic.oup.com
Heat-stable nucleoid-structuring protein (H-NS) is one of the main nucleoid proteins
expressed in exponentially growing Escherichia coli cells. In addition to a role in nucleoid …
expressed in exponentially growing Escherichia coli cells. In addition to a role in nucleoid …
Structure of the E. coli nucleoid-associated protein YejK reveals a novel DNA binding clamp
MA Schumacher, RR Singh… - Nucleic Acids Research, 2024 - academic.oup.com
Nucleoid-associated proteins (NAPs) play central roles in bacterial chromosome
organization and DNA processes. The Escherichia coli YejK protein is a highly abundant …
organization and DNA processes. The Escherichia coli YejK protein is a highly abundant …