Structural insights into the mechanism of group II intron splicing

C Zhao, AM Pyle - Trends in biochemical sciences, 2017 - cell.com
While the major architectural features and active-site components of group II introns have
been known for almost a decade, information on the individual stages of splicing has been …

Metal ion catalysis during the exon-ligation step of nuclear pre-mRNA splicing: extending the parallels between the spliceosome and group II introns.

PM Gordon, EJ Sontheimer, JA Piccirilli - Rna, 2000 - rnajournal.cshlp.org
Mechanistic analyses of nuclear pre-mRNA splicing by the spliceosome and group II intron
self-splicing provide insight into both the catalytic strategies of splicing and the evolutionary …

Crystal structure of a phage Twort group I ribozyme–product complex

BL Golden, H Kim, E Chase - Nature structural & molecular biology, 2005 - nature.com
Group I introns are catalytic RNAs capable of orchestrating two sequential
phosphotransesterification reactions that result in self-splicing. To understand how the group …

Metal ion catalysis during group II intron self-splicing: parallels with the spliceosome

EJ Sontheimer, PM Gordon… - Genes & development, 1999 - genesdev.cshlp.org
The identical reaction pathway executed by the spliceosome and self-splicing group II intron
ribozymes has prompted the idea that both may be derived from a common molecular …

Group I and group II introns

R Saldanha, G Mohr, M Belfort… - The FASEB …, 1993 - Wiley Online Library
Group I and group II introns are two types of RNA enzymes, ribozymes, that catalyze their
own splicing by different mechanisms. In this review, we summarize current information …

Group II introns: structure and catalytic versatility of large natural ribozymes

K Lehmann, U Schmidt - Critical reviews in biochemistry and …, 2003 - Taylor & Francis
Group II introns are large, natural catalytic RNAs or ribozymes that were discovered in
organelles of certain protists, fungi, algae, and plants and more recently also in prokaryotic …

Kinetic Characterization of the Second Step of Group II Intron Splicing: Role of Metal Ions and the Cleavage Site 2 '-OH in Catalysis

PM Gordon, EJ Sontheimer, JA Piccirilli - Biochemistry, 2000 - ACS Publications
The ai5γ group II intron from yeast excises itself from precursor transcripts in the absence of
proteins. When a shortened form of the intron containing all but the 3 '-terminal six …

Who activates the nucleophile in ribozyme catalysis? An answer from the splicing mechanism of group II introns

L Casalino, G Palermo, U Rothlisberger… - Journal of the …, 2016 - ACS Publications
Group II introns are Mg2+-dependent ribozymes that are considered to be the evolutionary
ancestors of the eukaryotic spliceosome, thus representing an ideal model system to …

Branch site bulge conformations in domain 6 determine functional sugar puckers in group II intron splicing

R Plangger, MA Juen, TP Hoernes… - Nucleic Acids …, 2019 - academic.oup.com
Although group II intron ribozymes are intensively studied the question how structural
dynamics affects splicing catalysis has remained elusive. We report for the first time that the …

Crystal structure of a self-spliced group II intron

N Toor, KS Keating, SD Taylor, AM Pyle - Science, 2008 - science.org
Group II introns are self-splicing ribozymes that catalyze their own excision from precursor
transcripts and insertion into new genetic locations. Here we report the crystal structure of an …