Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

CX Song, KE Szulwach, Y Fu, Q Dai, C Yi, X Li… - Nature …, 2011 - nature.com
Abstract In contrast to 5-methylcytosine (5-mC), which has been studied extensively,,, little is
known about 5-hydroxymethylcytosine (5-hmC), a recently identified epigenetic modification …

A novel method for the efficient and selective identification of 5-hydroxymethylcytosine in genomic DNA

AB Robertson, JA Dahl, CB Vågbø… - Nucleic acids …, 2011 - academic.oup.com
Abstract Recently, 5-hydroxymethylcytosine (5hmC) was identified in mammalian genomic
DNA. The biological role of this modification remains unclear; however, identifying the …

The anti-CMS technique for genome-wide mapping of 5-hydroxymethylcytosine

Y Huang, WA Pastor, JA Zepeda-Martínez, A Rao - Nature protocols, 2012 - nature.com
hydroxymethylcytosine (5hmC) is a recently discovered base in the mammalian genome,
produced upon oxidation of 5-methylcytosine (5mC) in a process catalyzed by TET proteins …

5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary

T Khare, S Pai, K Koncevicius, M Pal… - Nature structural & …, 2012 - nature.com
Abstract The 5-methylcytosine (5-mC) derivative 5-hydroxymethylcytosine (5-hmC) is
abundant in the brain for unknown reasons. Here we characterize the genomic distribution …

5‐Hydroxymethylcytosine, the sixth base of the genome

M Münzel, D Globisch, T Carell - … Chemie International Edition, 2011 - Wiley Online Library
Hydroxymethylcytosine (hmC) was recently discovered as a new constituent of mammalian
DNA. Besides 5‐methylcytosine (mC), it is the only other modified base in higher organisms …

Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine

M Yu, GC Hon, KE Szulwach, CX Song, P Jin, B Ren… - Nature protocols, 2012 - nature.com
A complete understanding of the potential function of 5-hydroxymethylcytosine (5-hmC), a
DNA cytosine modification in mammalian cells, requires an accurate single-base resolution …

Genomic mapping of 5-hydroxymethylcytosine in the human brain

SG Jin, X Wu, AX Li, GP Pfeifer - Nucleic acids research, 2011 - academic.oup.com
Methylation at the 5-position of cytosine is a well-studied epigenetic pathway. In addition to 5-
methylcytosine (5mC), substantial amounts of 5-hydroxymethylcytosine (5hmC) also referred …

[HTML][HTML] Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome

M Yu, GC Hon, KE Szulwach, CX Song, L Zhang, A Kim… - Cell, 2012 - cell.com
Summary The study of 5-hydroxylmethylcytosines (5hmC) has been hampered by the lack of
a method to map it at single-base resolution on a genome-wide scale. Affinity purification …

[HTML][HTML] Tissue-specific 5-hydroxymethylcytosine landscape of the human genome

B He, C Zhang, X Zhang, Y Fan, H Zeng, J Liu… - Nature …, 2021 - nature.com
Hydroxymethylcytosine (5hmC) is an important epigenetic mark that regulates gene
expression. Charting the landscape of 5hmC in human tissues is fundamental to …

5-Hydroxymethylcytosine is a predominantly stable DNA modification

M Bachman, S Uribe-Lewis, X Yang, M Williams… - Nature …, 2014 - nature.com
Hydroxymethylcytosine (hmC) is an oxidation product of 5-methylcytosine which is present
in the deoxyribonucleic acid (DNA) of most mammalian cells. Reduction of hmC levels in …