Comparative chloroplast genomics reveals the evolution of Pinaceae genera and subfamilies

CP Lin, JP Huang, CS Wu, CY Hsu… - Genome biology and …, 2010 - academic.oup.com
As the largest and the basal-most family of conifers, Pinaceae provides key insights into the
evolutionary history of conifers. We present comparative chloroplast genomics and analysis …

Comparative plastid genomics of Pinus species: Insights into sequence variations and phylogenetic relationships

U Zeb, WL Dong, TT Zhang, RN Wang… - … of Systematics and …, 2020 - Wiley Online Library
Pinus L. is the largest genus of conifers and provides a classical model for studying species
divergence and phylogenetic evolution by gymnosperms. However, our poor understanding …

Comparative chloroplast genomes of Pinaceae: insights into the mechanism of diversified genomic organizations

CS Wu, CP Lin, CY Hsu, RJ Wang… - Genome biology and …, 2011 - academic.oup.com
Pinaceae, the largest family of conifers, has diversified organizations of chloroplast
genomes (cpDNAs) with the two typical inverted repeats (IRs) highly reduced. To unravel the …

[HTML][HTML] Complete chloroplast genome sequence and comparative analysis of loblolly pine (Pinus taeda L.) with related species

S Asaf, AL Khan, MA Khan, R Shahzad, Lubna… - PLoS …, 2018 - journals.plos.org
Pinaceae, the largest family of conifers, has a diversified organization of chloroplast (cp)
genomes with two typical highly reduced inverted repeats (IRs). In the current study, we …

Use of simultaneous analyses to guide fossil-based calibrations of Pinaceae phylogeny

DS Gernandt, S Magallón… - … Journal of Plant …, 2008 - journals.uchicago.edu
Uncertainties in the age and phylogenetic position of Pinaceae fossils present significant
obstacles to our understanding of the timing of diversification in the family. We demonstrate …

Phylogeny and classification of Pinus

DS Gernandt, GG López, SO García, A Liston - Taxon, 2005 - Wiley Online Library
We used chloroplast DNA sequences from matK and rbcL to infer the phylogeny for 101 of
the approximately 111 species of Pinus (Pinaceae). At the level of subsection and above …

Phylogeny and evolutionary history of Pinaceae updated by transcriptomic analysis

JH Ran, TT Shen, H Wu, X Gong, XQ Wang - Molecular Phylogenetics and …, 2018 - Elsevier
Pinaceae comprises 11 genera, and represents the largest family of conifers with an
extensive wild distribution in the Northern Hemisphere. Intergeneric relationships of …

Discordant mtDNA and cpDNA phylogenies indicate geographic speciation and reticulation as driving factors for the diversification of the genus Picea

M Bouillé, S Senneville, J Bousquet - Tree Genetics & Genomes, 2011 - Springer
The phylogeny of the genus Picea was investigated by sequencing three loci from the
paternally inherited chloroplast genome (trnK, rbcL and trnTLF) and the intron 2 of the …

The evolutionary split of Pinaceae from other conifers: evidence from an intron loss and a multigene phylogeny

F Gugerli, C Sperisen, U Büchler, I Brunner… - Molecular Phylogenetics …, 2001 - Elsevier
The second intron in the mitochondrial gene nad1 was surveyed using PCR, DNA
sequencing, or Southern hybridization in 323 species (313 genera, 212 families) of seed …

Chloroplast DNA-based phylogeny of AsianPinus species (Pinaceae)

XR Wang, AE Szmidt - Plant Systematics and Evolution, 1993 - Springer
The genus Pinus includes over 90 species with approximately 24 species native to Asia. We
have analyzed the chloroplast (cp) DNA variation of 18 Pinus species, including 15 Asian …