Bioinformatic analysis of the LCN2–SLC22A17–MMP9 network in cancer: The role of DNA methylation in the modulation of tumor microenvironment

S Candido, B Tomasello, A Lavoro… - Frontiers in Cell and …, 2022 - frontiersin.org
Several features of cancer cells such as proliferation, invasion, metastatic spreading, and
drug resistance are affected by their interaction with several tumor microenvironment (TME) …

Integrative analysis with expanded DNA methylation data reveals common key regulators and pathways in cancers

S Fan, J Tang, N Li, Y Zhao, R Ai, K Zhang… - NPJ genomic …, 2019 - nature.com
The integration of genomic and DNA methylation data has been demonstrated as a powerful
strategy in understanding cancer mechanisms and identifying therapeutic targets. The TCGA …

Analyzing aberrant DNA methylation in colorectal cancer uncovered intangible heterogeneity of gene effects in the survival time of patients

S Hajebi Khaniki, F Shokoohi, H Esmaily… - Scientific Reports, 2023 - nature.com
Colorectal cancer (CRC) involves epigenetic alterations. Irregular gene-methylation
alteration causes and advances CRC tumor growth. Detecting differentially methylated …

Pan-Cancer Molecular Characterization of m6A Regulators and Immunogenomic Perspective on the Tumor Microenvironment

J Zhu, J Xiao, M Wang, D Hu - Frontiers in Oncology, 2021 - frontiersin.org
Purpose N6-methyladenosine (m6A) methylation plays a critical role in diverse biological
processes. However, knowledge regarding the constitution of m6A on tumor …

The impact of SLC10A3 on prognosis and immune microenvironment in colorectal adenocarcinoma

B Wang, W Fan, Y Tao, S Zhang, J Wang, Z Fan… - European Journal of …, 2024 - Springer
Background SLC10A3, a gene upregulated in pan-cancer, lacks full understanding
regarding its prognostic implications and association with immune infiltration in colorectal …

LINC00460 hypomethylation promotes metastasis in colorectal carcinoma

H Zhang, Y Lu, J Wu, J Feng - Frontiers in Genetics, 2019 - frontiersin.org
Introduction: Epigenetic alterations and aberrantly expressed long noncoding RNAs
(lncRNAs) are pervasive in colorectal cancer (CRC) tumorigenesis. DNA methylation could …

Pan-cancer analysis revealed H3K4me1 at bivalent promoters premarks DNA hypermethylation during tumor development and identified the regulatory role of DNA …

Y Lu, Q Cao, Y Yu, Y Sun, X Jiang, X Li - BMC genomics, 2023 - Springer
Background DNA hypermethylation at promoter CpG islands (CGIs) is a hallmark of cancers
and could lead to dysregulation of gene expression in the development of cancers, however …

In silico analysis of expression and DNA methylation profiles of NLRP13 inflammasome in tumor cells

FY Caldiran, C Berkel, K Deveci, E Cacan - Human Gene, 2022 - Elsevier
Background NOD-like receptor proteins (NLRs) are essential innate pattern recognition
receptors that play fundamental roles in inflammation, and they have been associated with …

[HTML][HTML] Methylated claudin-11 associated with metastasis and poor survival of colorectal cancer

J Li, C Zhou, S Ni, S Wang, C Ni, P Yang, M Ye - Oncotarget, 2017 - ncbi.nlm.nih.gov
As one of crucial epigenetic modification, DNA methylation plays an important role during
the carcinogenesis of colorectal cancer (CRC). In the current study, we used a human …

DNA hypermethylation is associated with invasive phenotype of malignant melanoma

V Koroknai, I Szász… - Experimental …, 2020 - Wiley Online Library
Tumor cell invasion is one of the key processes during cancer progression, leading to life‐
threatening metastatic lesions in melanoma. As methylation of cancer‐related genes plays a …