Genome-Wide Identification and Functional Prediction of Long Non-coding RNAs in the Genesis of Populus euphratica Oliv. Heteromorphic Leaves

Z Guo, S Qin, C Li, L Bao, W Yan, H Wu, L Zhao - Journal of plant biology, 2020 - Springer
Recent extensive studies of long non-coding RNAs (lncRNAs) have shown that lncRNAs
play an important role in plant development and growth. Populus euphratica Oliv. is the only …

[HTML][HTML] Genome-wide analysis of RNAs associated with Populus euphratica Oliv. heterophyll morphogenesis

SW Qin, RJ Jiang, N Zhang, ZW Liu, CL Li, ZZ Guo… - Scientific reports, 2018 - nature.com
The desert plant Populus euphratica Oliv. has typical heterophylly; linear (Li), lanceolate
(La), ovate (Ov) and broad-ovate (Bo) leaves grow in turn as trees develop to maturity. P …

[HTML][HTML] Deciphering shared attributes of plant long non-coding RNAs through a comparative computational approach

VK Yadav, SK Jalmi, S Tiwari, S Kerkar - Scientific Reports, 2023 - nature.com
Over the past decade, long non-coding RNA (lncRNA), which lacks protein-coding potential,
has emerged as an essential regulator of the genome. The present study examined 13,599 …

Identification and allelic dissection uncover roles of lncRNAs in secondary growth of Populus tomentosa

D Zhou, Q Du, J Chen, Q Wang, D Zhang - DNA research, 2017 - academic.oup.com
Long non-coding RNAs (lncRNAs) function in various biological processes. However, their
roles in secondary growth of plants remain poorly understood. Here, 15,691 lncRNAs were …

[HTML][HTML] Revealing the novel complexity of plant long non-coding RNA by strand-specific and whole transcriptome sequencing for evolutionarily representative plant …

Y Zhu, L Chen, X Hong, H Shi, X Li - BMC genomics, 2022 - Springer
Background Previous studies on plant long noncoding RNAs (lncRNAs) lacked consistency
and suffered from many factors like heterogeneous data sources and experimental …

Genome-wide analysis of long non-coding RNAs in shoot apical meristem and vascular cambium in Populus tomentosa

Y Guo, H Xu, B Chen, P Grünhofer, L Schreiber… - Journal of Plant …, 2022 - Elsevier
Shoot apical and lateral meristems play essential roles in the formation and development of
primary and secondary growth in plants. A delicate regulatory mechanism is needed to …

Genome-wide identification and characterization of novel lncRNAs in Populus under nitrogen deficiency

M Chen, C Wang, H Bao, H Chen, Y Wang - Molecular Genetics and …, 2016 - Springer
Long non-coding RNAs (lncRNAs) have been identified as important regulatory factors of
gene expression in eukaryotic species, such as Homo sapiens, Arabidopsis thaliana, and …

[HTML][HTML] Genome-Wide Identification and Characterization of Long Non-Coding RNAs from Mulberry (Morus notabilis) RNA-seq Data

X Song, L Sun, H Luo, Q Ma, Y Zhao, D Pei - Genes, 2016 - mdpi.com
Numerous sources of evidence suggest that most of the eukaryotic genome is transcribed
into protein-coding mRNAs and also into a large number of non-coding RNAs (ncRNAs) …

[HTML][HTML] Genome-Wide Identification and Characterization of Long Noncoding RNAs in Populus × canescens Roots Treated With Different Nitrogen Fertilizers

J Zhou, LY Yang, X Chen, WG Shi, SR Deng… - Frontiers in Plant …, 2022 - frontiersin.org
Nitrate (NO3−) and ammonium (NH4+) are the primary forms of inorganic nitrogen acquired
by plant roots. LncRNAs, as key regulators of gene expression, are a class of non-coding …

Genome-wide identification of novel long non-coding RNAs in Populus tomentosa tension wood, opposite wood and normal wood xylem by RNA-seq

J Chen, M Quan, D Zhang - Planta, 2015 - Springer
Increasing evidence shows that long non-coding RNAs (lncRNAs) function as important
regulatory factors during plant development, but few reports have examined lncRNAs in …