A comprehensive analysis of anion–quadrupole interactions in protein structures
S Chakravarty, AR Ung, B Moore, J Shore… - Biochemistry, 2018 - ACS Publications
The edgewise interactions of anions with phenylalanine (Phe) aromatic rings in proteins,
known as anion–quadrupole interactions, have been well studied. However, the anion …
known as anion–quadrupole interactions, have been well studied. However, the anion …
Electrostatics‐defying interaction between arginine termini as a thermodynamic driving force in protein–protein interaction
D Pednekar, A Tendulkar… - … : Structure, Function, and …, 2009 - Wiley Online Library
Apparent electrostatics‐defying clustering of arginines attributed as screening effect of
solvent is in this study examined as a possible thermodynamic driving force in protein …
solvent is in this study examined as a possible thermodynamic driving force in protein …
A preference for edgewise interactions between aromatic rings and carboxylate anions: the biological relevance of anion− quadrupole interactions
MR Jackson, R Beahm, S Duvvuru… - The Journal of …, 2007 - ACS Publications
Noncovalent interactions are quite important in biological structure− function relationships.
To study the pairwise interaction of aromatic amino acids (phenylalanine, tyrosine …
To study the pairwise interaction of aromatic amino acids (phenylalanine, tyrosine …
Highly Dynamic Anion–Quadrupole Networks in Proteins
K Kapoor, MR Duff, A Upadhyay, JC Bucci… - Biochemistry, 2016 - ACS Publications
The dynamics of anion–quadrupole (or anion− π) interactions formed between negatively
charged (Asp/Glu) and aromatic (Phe) side chains are for the first time computationally …
charged (Asp/Glu) and aromatic (Phe) side chains are for the first time computationally …
Structural and energetic study of cation–π–cation interactions in proteins
Cation–π interactions of aromatic rings and positively charged groups are among the most
important interactions in structural biology. The role and energetic characteristics of these …
important interactions in structural biology. The role and energetic characteristics of these …
AQcalc: A web server that identifies weak molecular interactions in protein structures
M Afshinpour, LA Smith, S Chakravarty - Protein Science, 2023 - Wiley Online Library
Weak molecular interactions play an important role in protein structure and function.
Computational tools that identify weak molecular interactions are, therefore, valuable for the …
Computational tools that identify weak molecular interactions are, therefore, valuable for the …
Cation–π interactions in protein–ligand binding: theory and data-mining reveal different roles for lysine and arginine
We have studied the cation–π interactions of neutral aromatic ligands with the cationic
amino acid residues arginine, histidine and lysine using ab initio calculations, symmetry …
amino acid residues arginine, histidine and lysine using ab initio calculations, symmetry …
Cation–π interactions in protein–protein interfaces
PB Crowley, A Golovin - Proteins: Structure, Function, and …, 2005 - Wiley Online Library
Arginine is an abundant residue in protein–protein interfaces. The importance of this residue
relates to the versatility of its side chain in intermolecular interactions. Different classes of …
relates to the versatility of its side chain in intermolecular interactions. Different classes of …
Contribution of cation-π interactions to the stability of protein-DNA complexes
Cation-π interactions between an aromatic ring and a positive charge located above it have
proven to be important in protein structures and biomolecule associations. Here, the role of …
proven to be important in protein structures and biomolecule associations. Here, the role of …
A survey of aspartate− phenylalanine and glutamate− phenylalanine interactions in the protein data bank: Searching for anion− π pairs
Protein structures are stabilized using noncovalent interactions. In addition to the traditional
noncovalent interactions, newer types of interactions are thought to be present in proteins …
noncovalent interactions, newer types of interactions are thought to be present in proteins …
相关搜索
- protein structures quadrupole interactions
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- aromatic rings carboxylate anions
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