Molecular knots in biology and chemistry

NCH Lim, SE Jackson - Journal of Physics: Condensed Matter, 2015 - iopscience.iop.org
Knots and entanglements are ubiquitous. Beyond their aesthetic appeal, these fascinating
topological entities can be either useful or cumbersome. In recent decades, the importance …

Knot theory in modern chemistry

KE Horner, MA Miller, JW Steed… - Chemical Society …, 2016 - pubs.rsc.org
Knot theory is a branch of pure mathematics, but it is increasingly being applied in a variety
of sciences. Knots appear in chemistry, not only in synthetic molecular design, but also in an …

Knotting matters: orderly molecular entanglements

Z Ashbridge, SDP Fielden, DA Leigh, L Pirvu… - Chemical Society …, 2022 - pubs.rsc.org
Entangling strands in a well-ordered manner can produce useful effects, from shoelaces and
fishing nets to brown paper packages tied up with strings. At the nanoscale, non-crystalline …

A synthetic molecular pentafoil knot

JF Ayme, JE Beves, DA Leigh, RT McBurney… - Nature …, 2012 - nature.com
Knots are being discovered with increasing frequency in both biological and synthetic
macromolecules and have been fundamental topological targets for chemical synthesis for …

Programming molecular topologies from single-stranded nucleic acids

X Qi, F Zhang, Z Su, S Jiang, D Han, B Ding… - Nature …, 2018 - nature.com
Molecular knots represent one of the most extraordinary topological structures in biological
polymers. Creating highly knotted nanostructures with well-defined and sophisticated …

A strategy to synthesize molecular knots and links using the hydrophobic effect

FBL Cougnon, K Caprice, M Pupier… - Journal of the …, 2018 - ACS Publications
Conventional approaches to the synthesis of molecular knots and links mostly rely on metal
templation. We present here an alternative strategy that uses the hydrophobic effect to drive …

Chemical topology: complex molecular knots, links, and entanglements

RS Forgan, JP Sauvage, JF Stoddart - Chemical Reviews, 2011 - ACS Publications
1.1. History and Background Knots and links are all around us (Figure 1). Be they functional
or decorative, we encounter them constantly, when, for example, tying simple bow knots in …

Molecular knots

C Dietrich-Buchecker, BX Colasson… - Templates in Chemistry II …, 2005 - Springer
Knots are fascinating non-trivial topological entities. They are not only present in art and
history but in many scientific fields as well, from mathematics to biology. By targeting this …

Effects of knot tightness at the molecular level

L Zhang, JF Lemonnier, A Acocella… - Proceedings of the …, 2019 - National Acad Sciences
Three 819 knots in closed-loop strands of different lengths (∼ 20, 23, and 26 nm) were used
to experimentally assess the consequences of knot tightness at the molecular level. Through …

Discovering privileged topologies of molecular knots with self-assembling models

M Marenda, E Orlandini, C Micheletti - Nature communications, 2018 - nature.com
Despite the several available strategies to build complex supramolecular constructs, only a
handful of different molecular knots have been synthesised so far. Here, in response to the …