Recombination and genetic differentiation among natural populations of the ectomycorrhizal mushroom Tricholoma matsutake from southwestern China

J Xu, TAO Sha, YANC LI, ZHIWEI ZHAO… - Molecular …, 2008 - Wiley Online Library
Effective conservation and utilization strategies for natural biological resources require a
clear understanding of the natural populations of the target organisms. Tricholoma …

Transposon-associated epigenetic silencing during Pleurotus ostreatus life cycle

A Borgognone, R Castanera, M Morselli… - DNA …, 2018 - academic.oup.com
Transposable elements constitute an important fraction of eukaryotic genomes. Given their
mutagenic potential, host-genomes have evolved epigenetic defense mechanisms to limit …

Agaricus bisporus genome sequence: a commentary

RW Kerrigan, MP Challen, KS Burton - Fungal Genetics and Biology, 2013 - Elsevier
The genomes of two isolates of Agaricus bisporus have been sequenced recently. This soil-
inhabiting fungus has a wide geographical distribution in nature and it is also cultivated in …

Construction and characterization of genomic libraries of two endomycorrhizal fungi: Glomus versiforme and Gigaspora margarita

ML Van Buuren, L Lanfranco, S Longato… - Mycological …, 1999 - cambridge.org
Arbuscular (AM) mycorrhizal fungi form symbiotic associations with the roots of plants that
lead to increased growth and health of many plants. The agricultural application of …

Characterization of the mitochondrial genomes of three species in the ectomycorrhizal genus Cantharellus and phylogeny of Agaricomycetes

Q Li, M Liao, M Yang, C Xiong, X Jin, Z Chen… - International journal of …, 2018 - Elsevier
Cantharellus is a large ectomycorrhizal genus. Here, we assembled and annotated the
mitochondrial genomes of C. lutescens, C. appalachiensis, and two specimens of C …

Trichoderma reesei complete genome sequence, repeat-induced point mutation, and partitioning of CAZyme gene clusters

WC Li, CH Huang, CL Chen, YC Chuang… - Biotechnology for …, 2017 - Springer
Abstract Background Trichoderma reesei (Ascomycota, Pezizomycotina) QM6a is a model
fungus for a broad spectrum of physiological phenomena, including plant cell wall …

Extreme overall mushroom genome expansion in Mycena ss irrespective of plant hosts or substrate specializations

CB Harder, S Miyauchi, M Virágh, A Kuo, E Thoen… - Cell Genomics, 2024 - cell.com
Mycena ss is a ubiquitous mushroom genus whose members degrade multiple dead plant
substrates and opportunistically invade living plant roots. Having sequenced the nuclear …

Characterization and potential evolutionary impact of transposable elements in the genome of Cochliobolus heterostrophus

MF Santana, JCF Silva, ESG Mizubuti, EF Araújo… - BMC genomics, 2014 - Springer
Background Cochliobolus heterostrophus is a dothideomycete that causes Southern Corn
Leaf Blight disease. There are two races, race O and race T that differ by the absence (race …

Widespread polycistronic transcripts in fungi revealed by single-molecule mRNA sequencing

SP Gordon, E Tseng, A Salamov, J Zhang, X Meng… - PloS one, 2015 - journals.plos.org
Genes in prokaryotic genomes are often arranged into clusters and co-transcribed into
polycistronic RNAs. Isolated examples of polycistronic RNAs were also reported in some …

Truffle Genomics: Investigating an Early Diverging Lineage of Pezizomycotina

C Murat, F Martin - True Truffle (Tuber spp.) in the World: Soil Ecology …, 2016 - Springer
Filamentous fungi genome sequencing began in the early 2000s and there are currently
1204 fungal genomes deposited in the NCBI database. The mycorrhizal species genome …