Gas chromatographic metabolic profiling: a sensitive tool for functional microbial ecology
Microbial metabolomics, which consists of a non-targeted analysis of the metabolites
released from ('exometabolome') or existing in ('endometabolome') a cell has mostly been …
released from ('exometabolome') or existing in ('endometabolome') a cell has mostly been …
Microbial metabolomics with gas chromatography/mass spectrometry
MM Koek, B Muilwijk, MJ van der Werf… - Analytical …, 2006 - ACS Publications
An analytical method was set up suitable for the analysis of microbial metabolomes,
consisting of an oximation and silylation derivatization reaction and subsequent analysis by …
consisting of an oximation and silylation derivatization reaction and subsequent analysis by …
Sample preparation procedures utilized in microbial metabolomics: An overview
M Patejko, J Jacyna, MJ Markuszewski - Journal of Chromatography B, 2017 - Elsevier
Bacteria are remarkably diverse in terms of their size, structure and biochemical properties.
Due to this fact, it is hard to develop a universal method for handling bacteria cultures during …
Due to this fact, it is hard to develop a universal method for handling bacteria cultures during …
[HTML][HTML] Extracellular microbial metabolomics: the state of the art
FR Pinu, SG Villas-Boas - Metabolites, 2017 - mdpi.com
Microorganisms produce and secrete many primary and secondary metabolites to the
surrounding environment during their growth. Therefore, extracellular metabolites provide …
surrounding environment during their growth. Therefore, extracellular metabolites provide …
Optimization of metabolomics of defined in vitro gut microbial ecosystems
DK Wissenbach, K Oliphant, U Rolle-Kampczyk… - International Journal of …, 2016 - Elsevier
The metabolic functionality of a microbial community is a key to the understanding of its
inherent ecological processes and the interaction with the host. However, the study of the …
inherent ecological processes and the interaction with the host. However, the study of the …
Microbial metabolomics: welcome to the real world!
EEK Baidoo, JD Keasling - 2013 - Springer
In the post-genomics era there has been a growing emphasis on understanding the
metabolic consequences of engineering cells to produce desired chemicals. Proteomics …
metabolic consequences of engineering cells to produce desired chemicals. Proteomics …
Microbial metabolomics
Systems biology has greatly increased our understanding of many cellular functions and cell–
cell interactions. Our awareness of the enormous range of activities performed by …
cell interactions. Our awareness of the enormous range of activities performed by …
Mass spectrometry-based microbial metabolomics
EEK Baidoo, PI Benke, JD Keasling - Microbial systems biology: methods …, 2012 - Springer
Through the characterization of metabolic pathways, metabolomics is able to illuminate the
activities of a cell at the functional level. However, the metabolome, which is comprised of …
activities of a cell at the functional level. However, the metabolome, which is comprised of …
Microbial metabolomics: a general overview
EEK Baidoo - Microbial Metabolomics: Methods and Protocols, 2019 - Springer
In the biosciences, there has been growing interest in the elucidation of gene function.
Consequently, metabolomics has garnered a lot of attention of late due to its provision of …
Consequently, metabolomics has garnered a lot of attention of late due to its provision of …
Progress and opportunities in microbial community metabolomics
Highlights•Microbiome-associated metabolite pools aid discovery of novel functions.•Guilt-
by-association approaches identify microbial derivatives of standard metabolites.•Machine …
by-association approaches identify microbial derivatives of standard metabolites.•Machine …