A common, non-optimal phenotypic endpoint in experimental adaptations of bacteriophage lysis time

L Chantranupong, RH Heineman - BMC Evolutionary Biology, 2012 - Springer
Background Optimality models of evolution, which ignore genetic details and focus on
natural selection, are widely used but sometimes criticized as oversimplifications. Their utility …

Genetic details, optimization and phage life histories

JJ Bull, DW Pfennig, N Wang - Trends in ecology & evolution, 2004 - cell.com
Optimality models assume that phenotypes evolve by natural selection largely
independently of underlying genetic mechanisms. This neglect of genetic mechanisms is …

Testing optimality with experimental evolution: lysis time in a bacteriophage

RH Heineman, JJ Bull - Evolution, 2007 - academic.oup.com
Optimality models collapse the vagaries of genetics into simple trade-offs to calculate
phenotypes expected to evolve by natural selection. Optimality approaches are commonly …

An optimal lysis time maximizes bacteriophage fitness in quasi-continuous culture

S Kannoly, A Singh, JJ Dennehy - Mbio, 2022 - Am Soc Microbiol
Optimality models have a checkered history in evolutionary biology. While optimality models
have been successful in providing valuable insight into the evolution of a wide variety of …

Lysis timing and bacteriophage fitness

IN Wang - Genetics, 2006 - academic.oup.com
The effect of lysis timing on bacteriophage (phage) fitness has received little theoretical or
experimental attention. Previously, the impact of lysis timing on phage fitness was studied …

Evolutionary robustness of an optimal phenotype: re-evolution of lysis in a bacteriophage deleted for its lysin gene

RH Heineman, IJ Molineux, JJ Bull - Journal of molecular evolution, 2005 - Springer
Optimality models are frequently used to create expectations about phenotypic evolution
based on the fittest possible phenotype. However, they often ignore genetic details, which …

The phenotype-fitness map in experimental evolution of phages

JJ Bull, RH Heineman, CO Wilke - PLoS One, 2011 - journals.plos.org
Evolutionary biologists commonly interpret adaptations of organisms by reference to a
phenotype-fitness map, a model of how different states of a phenotype affect fitness …

Optimality models of phage life history and parallels in disease evolution

JJ Bull - Journal of theoretical biology, 2006 - Elsevier
Optimality models constitute one of the simplest approaches to understanding phenotypic
evolution. Yet they have shortcomings that are not easily evaluated in most organisms. Most …

Genetically determined variation in lysis time variance in the bacteriophage φX174

CW Baker, CR Miller, T Thaweethai… - G3: Genes …, 2016 - academic.oup.com
Researchers in evolutionary genetics recently have recognized an exciting opportunity in
decomposing beneficial mutations into their proximal, mechanistic determinants. The …

Evolution of bacteriophage latent period length

ST Abedon - … Biology: Contemporary and Historical Reflections Upon …, 2023 - Springer
The life cycles of bacterial viruses—known as bacteriophages or phages—alternate
between the infection of individual cells, creating “virocells,” and phage existence instead as …