Plant organellar genomes: Much done, much more to do

J Wang, S Kan, X Liao, J Zhou, LR Tembrock… - Trends in plant …, 2024 - cell.com
Plastids and mitochondria are the only organelles that possess genomes of endosymbiotic
origin. In recent decades, advances in sequencing technologies have contributed to a …

Genome editing of plant mitochondrial and chloroplast genomes

S Arimura, I Nakazato - Plant and Cell Physiology, 2024 - academic.oup.com
Plastids (including chloroplasts) and mitochondria are remnants of endosymbiotic bacteria,
yet they maintain their own genomes, which encode vital components for photosynthesis …

[PDF][PDF] Next-generation organellar genomics: potentials and pitfalls of high-throughput technologies for molecular evolutionary studies and plant systematics

S Wicke, GM Schneeweiss - Next-generation sequencing in plant …, 2015 - researchgate.net
Plastid and mitochondrial genomes (plastomes and chondromes, respectively) are
rewarding objects for molecular evolutionary studies and useful tools in plant phylogenetics …

[PDF][PDF] Advancing organelle genome transformation and editing for crop improvement

S Li, L Chang, J Zhang - Plant communications, 2021 - cell.com
Plant cells contain three organelles that harbor DNA: the nucleus, plastids, and
mitochondria. Plastid transformation has emerged as an attractive platform for the …

Improvement of base editors and prime editors advances precision genome engineering in plants

K Hua, P Han, JK Zhu - Plant physiology, 2022 - academic.oup.com
Clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR associated
protein (Cas)-mediated gene disruption has revolutionized biomedical research as well as …

Engineering the plastid and mitochondrial genomes of flowering plants

P Maliga - Nature Plants, 2022 - nature.com
Engineering the plastid genome based on homologous recombination is well developed in
a few model species. Homologous recombination is also the rule in mitochondria, but …

Plant genome editing with TALEN and CRISPR

A Malzahn, L Lowder, Y Qi - Cell & bioscience, 2017 - Springer
Genome editing promises giant leaps forward in advancing biotechnology, agriculture, and
basic research. The process relies on the use of sequence specific nucleases (SSNs) to …

An efficient procedure for plant organellar genome assembly, based on whole genome data from the 454 GS FLX sequencing platform

T Zhang, X Zhang, S Hu, J Yu - Plant methods, 2011 - Springer
Motivation Complete organellar genome sequences (chloroplasts and mitochondria)
provide valuable resources and information for studying plant molecular ecology and …

GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

JJ Jin, WB Yu, JB Yang, Y Song, CW DePamphilis… - Genome biology, 2020 - Springer
GetOrganelle is a state-of-the-art toolkit to accurately assemble organelle genomes from
whole genome sequencing data. It recruits organelle-associated reads using a modified …

The plastid and mitochondrial genomes of Eucalyptus grandis

D Pinard, AA Myburg, E Mizrachi - BMC genomics, 2019 - Springer
Background Land plant organellar genomes have significant impact on metabolism and
adaptation, and as such, accurate assembly and annotation of plant organellar genomes is …