Motivation: Sampling structural models and ranking them are the two major challenges of
protein structure prediction. Traditional protein structure prediction methods generally use …

Critical assessment of structure prediction (CASP) is a community experiment to advance
methods of computing three‐dimensional protein structure from amino acid sequence. Core …

Fragment-based approaches are the current standard for de novo protein structure
prediction. These approaches rely on accurate and reliable fragment libraries to generate …

We present a short overview of the system governing data processing and automatic
evaluation of predictions in CASP6, implemented at the Livermore Protein Structure …

CASP has now completed a decade of monitoring the state of the art in protein structure
prediction. The quality of structure models produced in the latest experiment, CASP6, has …

Motivation: The success of the consensus approach to the protein structure prediction
problem has led to development of several different consensus methods. Most of them only …

For the 10th experiment on Critical Assessment of the techniques of protein Structure
Prediction (CASP), the prediction target proteins were broken into independent evaluation …

The biennial CASP experiment is a crucial way to evaluate, in an unbiased way, the
progress in predicting novel 3D protein structures. In this article, we assess the quality of …

We present an overview of the fifth round of Critical Assessment of Protein Structure
Prediction (CASP5) fold recognition category. Prediction models were evaluated by using …

We describe several notable aspects of our structure predictions using Rosetta in CASP12
in the free modeling (FM) and refinement (TR) categories. First, we had previously …