Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived …

S Renny-Byfield, M Chester, A Kovařík… - Molecular biology …, 2011 - academic.oup.com
We used next generation sequencing to characterize and compare the genomes of the
recently derived allotetraploid, Nicotiana tabacum (< 200,000 years old), with its diploid …

Deciphering the complex leaf transcriptome of the allotetraploid species Nicotiana tabacum: a phylogenomic perspective

A Bombarely, KD Edwards, J Sanchez-Tamburrino… - BMC genomics, 2012 - Springer
Background Polyploidization is an important mechanism in plant evolution. By analyzing the
leaf transcriptomes taken from the allotetraploid Nicotiana tabacum (tobacco) and parental …

Parental origin of the allotetraploid tobacco Nicotiana benthamiana

M Schiavinato, M Marcet‐Houben, JC Dohm… - The Plant …, 2020 - Wiley Online Library
Nicotiana section Suaveolentes is an almost all‐Australian clade of allopolyploid tobacco
species including the important plant model Nicotiana benthamiana. The homology …

Preferential elimination of repeated DNA sequences from the paternal, Nicotiana tomentosiformis genome donor of a synthetic, allotetraploid tobacco

K Skalicka, KY Lim, R Matyasek, M Matzke… - New …, 2005 - Wiley Online Library
Nicotiana tabacum (tobacco, 2n= 4x= 48) is a natural allotetraploid combining two ancestral
genomes closely related to modern Nicotiana sylvestris and Nicotiana tomentosiformis. Here …

Genome evolution in allotetraploid Nicotiana

KY Lim, R Matyasek, A Kovarik… - Biological Journal of the …, 2004 - academic.oup.com
The nuclear cytoplasmic interaction (NCI) hypothesis of genome evolution and speciation in
plants states that newly formed allopolyploids pass through a bottleneck of sterility and the …

Independent, Rapid and Targeted Loss of Highly Repetitive DNA in Natural and Synthetic Allopolyploids of Nicotiana tabacum

S Renny-Byfield, A Kovařík, M Chester, RA Nichols… - PloS one, 2012 - journals.plos.org
Allopolyploidy (interspecific hybridisation and polyploidy) has played a significant role in the
evolutionary history of angiosperms and can result in genomic, epigenetic and …

Concerted evolution of 18–5.8–26S rDNA repeats in Nicotiana allotetraploids

A Kovarik, R Matyasek, KY Lim… - Biological Journal of …, 2004 - academic.oup.com
We review and extend data showing concerted evolution of parental 18–5.8–26S nuclear
ribosomal DNA (18–26S rDNA) gene families in three natural Nicotiana allotetraploids (N …

The impact of genome evolution on the allotetraploid Nicotiana rustica – an intriguing story of enhanced alkaloid production

N Sierro, JND Battey, L Bovet, V Liedschulte, S Ouadi… - BMC genomics, 2018 - Springer
Abstract Background Nicotiana rustica (Aztec tobacco), like common tobacco (Nicotiana
tabacum), is an allotetraploid formed through a recent hybridization event; however, it …

Comparative genomics and repetitive sequence divergence in the species of diploid Nicotiana section Alatae

K Yoong Lim, A Kovarik, R Matyasek… - The Plant …, 2006 - Wiley Online Library
Combining phylogenetic reconstructions of species relationships with comparative genomic
approaches is a powerful way to decipher evolutionary events associated with genome …

Genome-wide repeat dynamics reflect phylogenetic distance in closely related allotetraploid Nicotiana (Solanaceae)

S Dodsworth, TS Jang, M Struebig, MW Chase… - Plant systematics and …, 2017 - Springer
Nicotiana sect. Repandae is a group of four allotetraploid species originating from a single
allopolyploidisation event approximately 5 million years ago. Previous phylogenetic …