Zooming in on protein–RNA interactions: a multi-level workflow to identify interaction partners
Interactions between proteins and RNA are at the base of numerous cellular regulatory and
functional phenomena. The investigation of the biological relevance of non-coding RNAs …
functional phenomena. The investigation of the biological relevance of non-coding RNAs …
RNA–protein interactions: an overview
RNA binding proteins (RBPs) are key players in the regulation of gene expression. In this
chapter we discuss the main protein–RNA recognition modes used by RBPs in order to …
chapter we discuss the main protein–RNA recognition modes used by RBPs in order to …
[HTML][HTML] Computational approaches for the analysis of RNA–protein interactions: a primer for biologists
KS Moore, P AC't Hoen - Journal of Biological Chemistry, 2019 - ASBMB
RNA-binding proteins (RBPs) play important roles in the control of gene expression and the
coordination of different layers of post-transcriptional regulation. Interactions between …
coordination of different layers of post-transcriptional regulation. Interactions between …
RNA-centric approaches to study RNA-protein interactions in vitro and in silico
Given their central role in translation, splicing, localization and stability of transcripts, RNA
binding proteins (RBPs) are key regulators of several cellular processes. While experimental …
binding proteins (RBPs) are key regulators of several cellular processes. While experimental …
High-throughput characterization of protein–RNA interactions
RNA-binding proteins (RBPs) are important regulators of eukaryotic gene expression.
Genomes typically encode dozens to hundreds of proteins containing RNA-binding …
Genomes typically encode dozens to hundreds of proteins containing RNA-binding …
RBPmap: a tool for mapping and predicting the binding sites of RNA-binding proteins considering the motif environment
I Paz, A Argoetti, N Cohen, N Even… - Post-Transcriptional …, 2022 - Springer
RNA-binding proteins (RBPs) play a key role in post-transcriptional regulation via binding to
coding and non-coding RNAs. Recent development in experimental technologies, aimed to …
coding and non-coding RNAs. Recent development in experimental technologies, aimed to …
[HTML][HTML] The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions
BM Beckmann, A Castello, J Medenbach - Pflügers Archiv-European …, 2016 - Springer
Post-transcriptional regulation of gene expression plays a critical role in almost all cellular
processes. Regulation occurs mostly by RNA-binding proteins (RBPs) that recognise RNA …
processes. Regulation occurs mostly by RNA-binding proteins (RBPs) that recognise RNA …
[HTML][HTML] Ribonomic approaches to study the RNA-binding proteome
C Faoro, SF Ataide - FEBS letters, 2014 - Elsevier
Gene expression is controlled through a complex interplay among mRNAs, non-coding
RNAs and RNA-binding proteins (RBPs), which all assemble along with other RNA …
RNAs and RNA-binding proteins (RBPs), which all assemble along with other RNA …
A brave new world of RNA-binding proteins
RNA-binding proteins (RBPs) are typically thought of as proteins that bind RNA through one
or multiple globular RNA-binding domains (RBDs) and change the fate or function of the …
or multiple globular RNA-binding domains (RBDs) and change the fate or function of the …