[PDF][PDF] Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms

TA Richards, JB Dacks, JM Jenkinson, CR Thornton… - Current Biology, 2006 - cell.com
Filamentous fungi and oomycetes are eukaryotic microorganisms that grow by producing
networks of thread-like hyphae, which secrete enzymes to break down complex nutrients …

[HTML][HTML] Genome evolution in fungal plant pathogens: looking beyond the two-speed genome model

DE Torres, U Oggenfuss, D Croll, MF Seidl - Fungal Biology Reviews, 2020 - Elsevier
The interaction of pathogens with their hosts creates strong reciprocal selection pressures.
Pathogens often deploy an arsenal of small proteins called effectors that manipulate the …

[HTML][HTML] Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts

IS Druzhinina, K Chenthamara, J Zhang… - PLoS …, 2018 - journals.plos.org
Unlike most other fungi, molds of the genus Trichoderma (Hypocreales, Ascomycota) are
aggressive parasites of other fungi and efficient decomposers of plant biomass. Although …

Fungal genomes and insights into the evolution of the kingdom

JE Stajich - Microbiology spectrum, 2017 - Am Soc Microbiol
The kingdom Fungi comprises species that inhabit nearly all ecosystems. Fungi exist as both
free-living and symbiotic unicellular and multicellular organisms with diverse morphologies …

Genomics of the fungal kingdom: insights into eukaryotic biology

JE Galagan, MR Henn, LJ Ma, CA Cuomo… - Genome …, 2005 - genome.cshlp.org
The last decade has witnessed a revolution in the genomics of the fungal kingdom. Since
the sequencing of the first fungus in 1996, the number of available fungal genome …

Mind the gap; seven reasons to close fragmented genome assemblies

BPHJ Thomma, MF Seidl, X Shi-Kunne… - Fungal Genetics and …, 2016 - Elsevier
Like other domains of life, research into the biology of filamentous microbes has greatly
benefited from the advent of whole-genome sequencing. Next-generation sequencing …

The genomics of obligate (and nonobligate) biotrophs

PD Spanu - Annual review of Phytopathology, 2012 - annualreviews.org
Biotrophy is a pervasive trait that evolved independently in plant pathogenic fungi and
oomycetes. Comparative genomics of the first sequenced biotrophic pathogens highlight …

Pathogenomics of fungal plant parasites: what have we learnt about pathogenesis?

SM Schmidt, R Panstruga - Current opinion in plant biology, 2011 - Elsevier
Members of the kingdom fungi comprise numerous plant pathogens, including the causal
agents of many agriculturally relevant plant diseases such as rust, powdery mildew, rice …

[HTML][HTML] Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary …

JF Dallery, N Lapalu, A Zampounis, S Pigné, I Luyten… - BMC genomics, 2017 - Springer
Abstract Background The ascomycete fungus Colletotrichum higginsianum causes
anthracnose disease of brassica crops and the model plant Arabidopsis thaliana. Previous …

How do obligate parasites evolve? A multi-gene phylogenetic analysis of downy mildews

M Göker, H Voglmayr, A Riethmüller… - Fungal Genetics and …, 2007 - Elsevier
Plant parasitism has independently evolved as a nutrition strategy in both true fungi and
Oomycetes (stramenopiles). A large number of species within phytopathogenic Oomycetes …