[PDF][PDF] Transposable Elements Contribute to Genome Dynamics and Gene Expression Variation in the Fungal Plant Pathogen Verticillium dahliae

DE Torres, BPHJ Thomma… - Genome Biology and …, 2021 - academic.oup.com
Transposable elements (TEs) are a major source of genetic and regulatory variation in their
host genome and are consequently thought to play important roles in evolution. Many fungal …

Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names

NN Wijayawardene, PW Crous, PM Kirk… - Fungal Diversity, 2014 - Springer
Abstract Article 59.1, of the International Code of Nomenclature for Algae, Fungi, and Plants
(ICN; Melbourne Code), which addresses the nomenclature of pleomorphic fungi, became …

[HTML][HTML] Pan-genome analyses of model fungal species

CGP McCarthy, DA Fitzpatrick - Microbial genomics, 2019 - microbiologyresearch.org
The concept of the species 'pan-genome', the union of 'core'conserved genes and all
'accessory'non-conserved genes across all strains of a species, was first proposed in …

The genomes of three uneven siblings: footprints of the lifestyles of three Trichoderma species

M Schmoll, C Dattenböck… - Microbiology and …, 2016 - Am Soc Microbiol
The genus Trichoderma contains fungi with high relevance for humans, with applications in
enzyme production for plant cell wall degradation and use in biocontrol. Here, we provide a …

[HTML][HTML] A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres

SR Ellwood, Z Liu, RA Syme, Z Lai, JK Hane, F Keiper… - Genome biology, 2010 - Springer
Background Pyrenophora teres f. teres is a necrotrophic fungal pathogen and the cause of
one of barley's most important diseases, net form of net blotch. Here we report the first …

[HTML][HTML] The evolution of fungal metabolic pathways

JH Wisecaver, JC Slot, A Rokas - PLoS genetics, 2014 - journals.plos.org
Fungi contain a remarkable range of metabolic pathways, sometimes encoded by gene
clusters, enabling them to digest most organic matter and synthesize an array of potent small …

FungiDB: an integrated functional genomics database for fungi

JE Stajich, T Harris, BP Brunk, J Brestelli… - Nucleic acids …, 2012 - academic.oup.com
Abstract FungiDB (http://FungiDB. org) is a functional genomic resource for pan-fungal
genomes that was developed in partnership with the Eukaryotic Pathogen Bioinformatic …

Gene Loss Rather Than Gene Gain Is Associated with a Host Jump from Monocots to Dicots in the Smut Fungus Melanopsichium pennsylvanicum

R Sharma, B Mishra, F Runge… - Genome biology and …, 2014 - academic.oup.com
Smut fungi are well-suited to investigate the ecology and evolution of plant pathogens, as
they are strictly biotrophic, yet cultivable on media. Here we report the genome sequence of …

Pathogenicity genes of phytopathogenic fungi

A Idnurm, BJ Howlett - Molecular Plant Pathology, 2001 - Wiley Online Library
Recently many fungal genes have been identified that, when disrupted, result in strains with
a reduction or total loss of disease symptoms. Such pathogenicity genes are the subject of …

[HTML][HTML] Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

M Peter, A Kohler, RA Ohm, A Kuo, J Krützmann… - Nature …, 2016 - nature.com
The most frequently encountered symbiont on tree roots is the ascomycete Cenococcum
geophilum, the only mycorrhizal species within the largest fungal class Dothideomycetes, a …