[HTML][HTML] Patterns of somatic structural variation in human cancer genomes
A key mutational process in cancer is structural variation, in which rearrangements delete,
amplify or reorder genomic segments that range in size from kilobases to whole …
amplify or reorder genomic segments that range in size from kilobases to whole …
The evolutionary history of 2,658 cancers
Cancer develops through a process of somatic evolution,. Sequencing data from a single
biopsy represent a snapshot of this process that can reveal the timing of specific genomic …
biopsy represent a snapshot of this process that can reveal the timing of specific genomic …
Recurrent and functional regulatory mutations in breast cancer
Genomic analysis of tumours has led to the identification of hundreds of cancer genes on the
basis of the presence of mutations in protein-coding regions. By contrast, much less is …
basis of the presence of mutations in protein-coding regions. By contrast, much less is …
Cell-of-origin chromatin organization shapes the mutational landscape of cancer
Cancer is a disease potentiated by mutations in somatic cells. Cancer mutations are not
distributed uniformly along the human genome. Instead, different human genomic regions …
distributed uniformly along the human genome. Instead, different human genomic regions …
Dynamics of genomic clones in breast cancer patient xenografts at single-cell resolution
Human cancers, including breast cancers, comprise clones differing in mutation content.
Clones evolve dynamically in space and time following principles of Darwinian evolution …
Clones evolve dynamically in space and time following principles of Darwinian evolution …
Discovery and saturation analysis of cancer genes across 21 tumour types
Although a few cancer genes are mutated in a high proportion of tumours of a given type (>
20%), most are mutated at intermediate frequencies (2–20%). To explore the feasibility of …
20%), most are mutated at intermediate frequencies (2–20%). To explore the feasibility of …
Signatures of copy number alterations in human cancer
Gains and losses of DNA are prevalent in cancer and emerge as a consequence of inter-
related processes of replication stress, mitotic errors, spindle multipolarity and breakage …
related processes of replication stress, mitotic errors, spindle multipolarity and breakage …
Comprehensive analysis of structural variants in breast cancer genomes using single-molecule sequencing
Improved identification of structural variants (SVs) in cancer can lead to more targeted and
effective treatment options as well as advance our basic understanding of the disease and …
effective treatment options as well as advance our basic understanding of the disease and …
Barcoding reveals complex clonal dynamics of de novo transformed human mammary cells
Most human breast cancers have diversified genomically and biologically by the time they
become clinically evident,,. Early events involved in their genesis and the cellular context in …
become clinically evident,,. Early events involved in their genesis and the cellular context in …
Comprehensive molecular portraits of human breast tumours
Brigham & Women's Hospital & Harvard Medical … - Nature, 2012 - nature.com
We analysed primary breast cancers by genomic DNA copy number arrays, DNA
methylation, exome sequencing, messenger RNA arrays, microRNA sequencing and …
methylation, exome sequencing, messenger RNA arrays, microRNA sequencing and …