The Delta variant wave in Tunisia: genetic diversity, spatio-temporal distribution and evidence of the spread of a divergent AY. 122 sub-lineage

S Haddad-Boubaker, M Arbi, O Souiai… - Frontiers in Public …, 2023 - frontiersin.org
Introduction The Delta variant posed an increased risk to global public health and rapidly
replaced the pre-existent variants worldwide. In this study, the genetic diversity and the …

SARS‐COV‐2 genomic monitoring in the state of São Paulo unveils two emerging AY. 43 sublineages

ARJ Lima, G Ribeiro, VL Viala… - Journal of Medical …, 2022 - Wiley Online Library
Delta VOC is highly diverse with more than 120 sublineages already described as of
November 30, 2021. In this study, through active monitoring of circulating severe acute …

Dispersal history of SARS-CoV-2 variants Alpha, Delta, and Omicron (BA. 1) in Spain

P Gallego-García, SL Hong, N Bollen, S Dellicour… - medRxiv, 2024 - medrxiv.org
Different factors influence the spread of SARS-CoV-2, from the inherent transmission
capabilities of the different variants to the control measurements put in place. Here we …

Intense P. 1 (Gamma) diversification followed by rapid Delta substitution in Southern Brazil: a SARS-CoV-2 genomic epidemiology study

PAG Ferrareze, GB Cybis, LFV de Oliveira… - Microbes and …, 2024 - Elsevier
The analyses of genetic traits, dispersion patterns and phylogenomics are essential for
understanding the evolutionary forces driving SARS-CoV-2 viruses in these three years of …

Genomic surveillance of SARS-CoV-2 tracks early interstate transmission of P. 1 lineage and diversification within P. 2 clade in Brazil

AP Lamarca, LGP de Almeida… - PLoS neglected …, 2021 - journals.plos.org
The sharp increase of COVID-19 cases in late 2020 has made Brazil the new epicenter of
the ongoing SARS-CoV-2 pandemic. The novel viral lineages P. 1 (Variant of Concern …

Dynamics of early establishment of SARS-coV-2 VOC omicron lineages in minas gerais, Brazil

MT de Menezes, FRR Moreira, C Whittaker, FM Santos… - Viruses, 2023 - mdpi.com
Brazil is one of the nations most affected by Coronavirus disease 2019 (COVID-19). The
introduction and establishment of new virus variants can be related to an increase in cases …

SARS-CoV-2 Delta variant isolates from vaccinated individuals

L Brinkac, S Diepold, S Mitchell, S Sarnese… - BMC genomics, 2022 - Springer
Abstract Background The SARS-CoV-2 Delta variant was first identified in the US in March
2021 and has rapidly become the predominant lineage across the US due to increased …

Emergence of the novel SARS-CoV-2 lineage VUI-NP13L and massive spread of P. 2 in South Brazil

FH Sant'Anna, AP Muterle Varela… - Emerging Microbes & …, 2021 - Taylor & Francis
In this study, we analyzed 340 whole genomes of SARS-CoV-2, which were sampled
between April and November 2020 in 33 cities of Rio Grande do Sul, South Brazil. We …

[HTML][HTML] Early detection of P. 1 variant of SARS-CoV-2 in a cluster of cases in Salvador, Brazil

IC de Siqueira, AA Camelier, EAP Maciel… - International Journal of …, 2021 - Elsevier
We report 3 cases of severe COVID-19 due to the SARS-CoV-2 P. 1 lineage in a familial
cluster detected in Salvador, Bahia–Brazil. All cases were linked to travel by family members …

[HTML][HTML] Viral infection and transmission in a large well-traced outbreak caused by the Delta SARS-CoV-2 variant

B Li, A Deng, K Li, Y Hu, Z Li, Q Xiong, Z Liu, Q Guo… - image, 2021 - covid19.sld.cu
We report the first local transmission of the Delta SARS-CoV-2 variant in mainland China. All
167 infections could be traced back to the first index case. The investigation on daily …