Predicted residual error sum of squares of mixed models: an application for genomic prediction
S Xu - G3: Genes, Genomes, Genetics, 2017 - academic.oup.com
Genomic prediction is a statistical method to predict phenotypes of polygenic traits using
high-throughput genomic data. Most diseases and behaviors in humans and animals are …
high-throughput genomic data. Most diseases and behaviors in humans and animals are …
A nested mixture model for genomic prediction using whole-genome SNP genotypes
Genomic prediction exploits single nucleotide polymorphisms (SNPs) across the whole
genome for predicting genetic merit of selection candidates. In most models for genomic …
genome for predicting genetic merit of selection candidates. In most models for genomic …
Genome-enabled prediction methods based on machine learning
EL Reinoso-Peláez, D Gianola… - Genomic prediction of …, 2022 - Springer
Growth of artificial intelligence and machine learning (ML) methodology has been explosive
in recent years. In this class of procedures, computers get knowledge from sets of …
in recent years. In this class of procedures, computers get knowledge from sets of …
Influence of genetic interactions on polygenic prediction
Prediction of phenotypes from genotypes is an important objective to fulfill the promises of
genomics, precision medicine and agriculture. Although it's now possible to account for the …
genomics, precision medicine and agriculture. Although it's now possible to account for the …
A computationally efficient algorithm for genomic prediction using a Bayesian model
Background Genomic prediction of breeding values from dense single nucleotide
polymorphisms (SNP) genotypes is used for livestock and crop breeding, and can also be …
polymorphisms (SNP) genotypes is used for livestock and crop breeding, and can also be …
HIBLUP: an integration of statistical models on the BLUP framework for efficient genetic evaluation using big genomic data
Human diseases and agricultural traits can be predicted by modeling a genetic random
polygenic effect in linear mixed models. To estimate variance components and predict …
polygenic effect in linear mixed models. To estimate variance components and predict …
Prediction of complex human traits using the genomic best linear unbiased predictor
G de Los Campos, AI Vazquez, R Fernando… - PLoS …, 2013 - journals.plos.org
Despite important advances from Genome Wide Association Studies (GWAS), for most
complex human traits and diseases, a sizable proportion of genetic variance remains …
complex human traits and diseases, a sizable proportion of genetic variance remains …
Fast genomic predictions via Bayesian G-BLUP and multilocus models of threshold traits including censored Gaussian data
HP Kärkkäinen, MJ Sillanpää - G3: Genes, Genomes, Genetics, 2013 - academic.oup.com
Because of the increased availability of genome-wide sets of molecular markers along with
reduced cost of genotyping large samples of individuals, genomic estimated breeding …
reduced cost of genotyping large samples of individuals, genomic estimated breeding …
Genomic prediction accounting for residual heteroskedasticity
Whole-genome prediction (WGP) models that use single-nucleotide polymorphism marker
information to predict genetic merit of animals and plants typically assume homogeneous …
information to predict genetic merit of animals and plants typically assume homogeneous …
Genomic prediction including SNP-specific variance predictors
EF Mouresan, M Selle… - G3: Genes, Genomes …, 2019 - academic.oup.com
The increasing amount of available biological information on the markers can be used to
inform the models applied for genomic selection to improve predictions. The objective of this …
inform the models applied for genomic selection to improve predictions. The objective of this …