Xmipp 3.0: an improved software suite for image processing in electron microscopy

JM De la Rosa-Trevín, J Otón, R Marabini… - Journal of structural …, 2013 - Elsevier
Xmipp is a specialized software package for image processing in electron microscopy, and
that is mainly focused on 3D reconstruction of macromolecules through single-particles …

XMIPP: a new generation of an open-source image processing package for electron microscopy

COS Sorzano, R Marabini, J Velázquez-Muriel… - Journal of structural …, 2004 - Elsevier
X-windows based microscopy image processing package (Xmipp) is a specialized suit of
image processing programs, primarily aimed at obtaining the 3D reconstruction of biological …

Bsoft: image and molecular processing in electron microscopy

JB Heymann - Journal of structural biology, 2001 - Elsevier
Software for the processing of electron micrographs in structural biology suffers from
incompatibility between different packages, poor definition and choice of conventions, and a …

Ximdisp—a visualization tool to aid structure determination from electron microscope images

JM Smith - Journal of structural biology, 1999 - Elsevier
The display of digitized electron microscope images on a computer screen is a crucial first
step in the computation of macromolecular structures. It is also essential to be able to …

Bsoft: image processing and molecular modeling for electron microscopy

JB Heymann, DM Belnap - Journal of structural biology, 2007 - Elsevier
Bsoft is a software package written for image processing of electron micrographs,
interpretation of reconstructions, molecular modeling, and general image processing. The …

The EM program package: a platform for image processing in biological electron microscopy

R Hegerl - Journal of structural biology, 1996 - Elsevier
EM is a software package developed for image processing in the field of biological electron
microscopy. After a brief summary of its history, an outline of the package is given, by …

SPARX, a new environment for Cryo-EM image processing

M Hohn, G Tang, G Goodyear, PR Baldwin… - Journal of structural …, 2007 - Elsevier
SPARX (single particle analysis for resolution extension) is a new image processing
environment with a particular emphasis on transmission electron microscopy (TEM) structure …

Xmipp: an image processing package for electron microscopy

R Marabini, IM Masegosa, MC San Martın… - Journal of structural …, 1996 - Elsevier
We present in this article a specialized suite of image processing programs primarily aimed
at obtaining the three-dimensional reconstruction of biological specimens from large sets of …

EMAN2: an extensible image processing suite for electron microscopy

G Tang, L Peng, PR Baldwin, DS Mann, W Jiang… - Journal of structural …, 2007 - Elsevier
EMAN is a scientific image processing package with a particular focus on single particle
reconstruction from transmission electron microscopy (TEM) images. It was first released in …

SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields

J Frank, M Radermacher, P Penczek, J Zhu, Y Li… - Journal of structural …, 1996 - Elsevier
The SPIDER system has evolved into a comprehensive tool set for image processing,
making use of modern graphics interfacing in the VMS and UNIX environment. SPIDER and …