[HTML][HTML] BioCreative V CDR task corpus: a resource for chemical disease relation extraction
J Li, Y Sun, RJ Johnson, D Sciaky, CH Wei… - Database, 2016 - academic.oup.com
Community-run, formal evaluations and manually annotated text corpora are critically
important for advancing biomedical text-mining research. Recently in BioCreative V, a new …
important for advancing biomedical text-mining research. Recently in BioCreative V, a new …
[PDF][PDF] Annotating chemicals, diseases, and their interactions in biomedical literature
J Li, Y Sun, R Johnson… - … of the fifth …, 2015 - biocreative.bioinformatics.udel.edu
Community-run formal evaluations and manually annotated text corpora are critically
important for advancing biomedical text mining research. Recently in BioCreative V, a new …
important for advancing biomedical text mining research. Recently in BioCreative V, a new …
Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task
Manually curating chemicals, diseases and their relationships is significantly important to
biomedical research, but it is plagued by its high cost and the rapid growth of the biomedical …
biomedical research, but it is plagued by its high cost and the rapid growth of the biomedical …
[HTML][HTML] Improving chemical disease relation extraction with rich features and weakly labeled data
Background Due to the importance of identifying relations between chemicals and diseases
for new drug discovery and improving chemical safety, there has been a growing interest in …
for new drug discovery and improving chemical safety, there has been a growing interest in …
Chemical-induced disease relation extraction via convolutional neural network
This article describes our work on the BioCreative-V chemical–disease relation (CDR)
extraction task, which employed a maximum entropy (ME) model and a convolutional neural …
extraction task, which employed a maximum entropy (ME) model and a convolutional neural …
CD-REST: a system for extracting chemical-induced disease relation in literature
Mining chemical-induced disease relations embedded in the vast biomedical literature could
facilitate a wide range of computational biomedical applications, such as …
facilitate a wide range of computational biomedical applications, such as …
[PDF][PDF] Overview of DrugProt BioCreative VII track: quality evaluation and large scale text mining of drug-gene/protein relations
Considering recent progress in NLP, deep learning techniques and biomedical language
models there is a pressing need to generate annotated resources and comparable …
models there is a pressing need to generate annotated resources and comparable …
Exploiting syntactic and semantics information for chemical–disease relation extraction
H Zhou, H Deng, L Chen, Y Yang, C Jia, D Huang - Database, 2016 - academic.oup.com
Identifying chemical–disease relations (CDR) from biomedical literature could improve
chemical safety and toxicity studies. This article proposes a novel syntactic and semantic …
chemical safety and toxicity studies. This article proposes a novel syntactic and semantic …
Extracting chemical–protein relations with ensembles of SVM and deep learning models
Mining relations between chemicals and proteins from the biomedical literature is an
increasingly important task. The CHEMPROT track at BioCreative VI aims to promote the …
increasingly important task. The CHEMPROT track at BioCreative VI aims to promote the …
Chemical–gene relation extraction using recursive neural network
S Lim, J Kang - Database, 2018 - academic.oup.com
In this article, we describe our system for the CHEMPROT task of the BioCreative VI
challenge. Although considerable research on the named entity recognition of genes and …
challenge. Although considerable research on the named entity recognition of genes and …