Medical knowledge graph: Data sources, construction, reasoning, and applications

X Wu, J Duan, Y Pan, M Li - Big Data Mining and Analytics, 2023 - ieeexplore.ieee.org
Medical knowledge graphs (MKGs) are the basis for intelligent health care, and they have
been in use in a variety of intelligent medical applications. Thus, understanding the research …

PharmKG: a dedicated knowledge graph benchmark for bomedical data mining

S Zheng, J Rao, Y Song, J Zhang, X Xiao… - Briefings in …, 2021 - academic.oup.com
Biomedical knowledge graphs (KGs), which can help with the understanding of complex
biological systems and pathologies, have begun to play a critical role in medical practice …

Ensembles of knowledge graph embedding models improve predictions for drug discovery

D Rivas-Barragan, D Domingo-Fernández… - Briefings in …, 2022 - academic.oup.com
Abstract Recent advances in Knowledge Graphs (KGs) and Knowledge Graph Embedding
Models (KGEMs) have led to their adoption in a broad range of fields and applications. The …

FHIR-Ontop-OMOP: Building clinical knowledge graphs in FHIR RDF with the OMOP Common data Model

G Xiao, E Pfaff, E Prud'hommeaux, D Booth… - Journal of biomedical …, 2022 - Elsevier
Abstract Background Knowledge graphs (KGs) play a key role to enable explainable
artificial intelligence (AI) applications in healthcare. Constructing clinical knowledge graphs …

Intelligible models for healthcare: Predicting pneumonia risk and hospital 30-day readmission

R Caruana, Y Lou, J Gehrke, P Koch, M Sturm… - Proceedings of the 21th …, 2015 - dl.acm.org
In machine learning often a tradeoff must be made between accuracy and intelligibility. More
accurate models such as boosted trees, random forests, and neural nets usually are not …

MPTN: A message-passing transformer network for drug repurposing from knowledge graph

Y Liu, G Sang, Z Liu, Y Pan, J Cheng… - Computers in Biology and …, 2024 - Elsevier
Drug repurposing (DR) based on knowledge graphs (KGs) is challenging, which uses
knowledge graph reasoning models to predict new therapeutic pathways for existing drugs …

Explainable machine learning on AmsterdamUMCdb for ICU discharge decision support: uniting intensivists and data scientists

PJ Thoral, M Fornasa, DP De Bruin… - Critical care …, 2021 - journals.lww.com
Objectives: Unexpected ICU readmission is associated with longer length of stay and
increased mortality. To prevent ICU readmission and death after ICU discharge, our team of …

Knowledge graph construction for heart failure using large language models with prompt engineering

T Xu, Y Gu, M Xue, R Gu, B Li, X Gu - Frontiers in Computational …, 2024 - frontiersin.org
Introduction Constructing an accurate and comprehensive knowledge graph of specific
diseases is critical for practical clinical disease diagnosis and treatment, reasoning and …

Predicting discharge destination of critically ill patients using machine learning

ZSH Abad, DM Maslove, J Lee - IEEE journal of biomedical and …, 2020 - ieeexplore.ieee.org
Decision making about discharge destination for critically ill patients is a highly subjective
and multidisciplinary process, heavily reliant on the ICU care team, patients and their …

[HTML][HTML] Marrying medical domain knowledge with deep learning on electronic health records: a deep visual analytics approach

R Li, C Yin, S Yang, B Qian, P Zhang - Journal of medical Internet research, 2020 - jmir.org
Background Deep learning models have attracted significant interest from health care
researchers during the last few decades. There have been many studies that apply deep …