Prediction of protein essentiality by the improved particle swarm optimization
W Liu, J Wang, L Chen, BL Chen - Soft Computing, 2018 - Springer
The essential protein is very important for understanding cellular critical activities and
development. With the development of high throughput technology, how to identify the …
development. With the development of high throughput technology, how to identify the …
PEPRF: identification of essential proteins by integrating topological features of PPI network and sequence-based features via random forest
C Wu, B Lin, K Shi, Q Zhang, R Gao, Z Yu… - Current …, 2021 - ingentaconnect.com
Background: Essential proteins play an important role in the process of life, which can be
identified by experimental methods and computational approaches. Experimental …
identified by experimental methods and computational approaches. Experimental …
Predicting essential proteins from protein-protein interactions using order statistics
Many computational methods have been proposed to predict essential proteins from protein-
protein interaction (PPI) networks. However, it is still challenging to improve the prediction …
protein interaction (PPI) networks. However, it is still challenging to improve the prediction …
Artificial fish swarm optimization based method to identify essential proteins
It is well known that essential proteins play an extremely important role in controlling cellular
activities in living organisms. Identifying essential proteins from protein protein interaction …
activities in living organisms. Identifying essential proteins from protein protein interaction …
Effective identification of essential proteins based on priori knowledge, network topology and gene expressions
Identification of essential proteins is very important for understanding the minimal
requirements for cellular life and also necessary for a series of practical applications, such …
requirements for cellular life and also necessary for a series of practical applications, such …
Essential protein prediction based on node2vec and XGBoost
Essential proteins are a vital part of the survival of organisms and cells. Identification of
essential proteins lays a solid foundation for understanding protein functions and …
essential proteins lays a solid foundation for understanding protein functions and …
[HTML][HTML] Evolution of centrality measurements for the detection of essential proteins in biological networks
M Jalili, A Salehzadeh-Yazdi, S Gupta… - Frontiers in …, 2016 - frontiersin.org
Current breakthroughs in high-throughput technologies have propelled the development of
databases that systematically store knowledge of how genes, proteins, and metabolites …
databases that systematically store knowledge of how genes, proteins, and metabolites …
Identifying essential proteins via integration of protein interaction and gene expression data
Essential proteins are vital for an organism's viability under a variety of conditions.
Computational prediction of essential proteins based on the global protein-protein …
Computational prediction of essential proteins based on the global protein-protein …
[HTML][HTML] A deep learning framework for identifying essential proteins based on multiple biological information
Y Yue, C Ye, PY Peng, HX Zhai, I Ahmad, C Xia… - BMC …, 2022 - Springer
Abstract Background Essential Proteins are demonstrated to exert vital functions on cellular
processes and are indispensable for the survival and reproduction of the organism …
processes and are indispensable for the survival and reproduction of the organism …
Construction of refined protein interaction network for predicting essential proteins
Identification of essential proteins based on protein interaction network (PIN) is a very
important and hot topic in the post genome era. Up to now, a number of network-based …
important and hot topic in the post genome era. Up to now, a number of network-based …